KEGG   Xanthobacter autotrophicus: Xaut_1470Help
Entry
Xaut_1470         CDS       T00581                                 

Definition
ATP dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
xau  Xanthobacter autotrophicus
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:xau00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Xaut_1470
   03420 Nucleotide excision repair
    Xaut_1470
   03430 Mismatch repair
    Xaut_1470
   03450 Non-homologous end-joining
    Xaut_1470
Enzymes [BR:xau01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Xaut_1470
DNA repair and recombination proteins [BR:xau03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Xaut_1470
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1679891..1681519)
Genome map
AA seq 542 aa AA seqDB search
MNRFAALLDRMSYEAGRNAKIRLMADYFRTTPDPERGFALAALTGALSFANAKPGVVRAL
IMERADPVLFEMSYDYVGDLSETVALMWPRLEGAPTHAPLLSEIVHGLSTLSRSTLPRRL
ADWLDGLDETGRWALLKLITGAMRVGASARLAKTALASLGSVTPDEVELVWPGLAPPYEE
LFAWVEGHGPRPETSNPAPFRPVMLAHAIEEANFADLAPGDFSAEWKWDGIRVQAVAGTG
ADGVRAVRLYSRTGEDISEAFPDLADAIAFNGAMDGELLIVRAGRVEPFNVLQQRLNRKS
VTVKMLAEFPAHIRAYDLLVDGDEDLRALPFTARRARLEALVTRLSSPRIDLSPLVPFAG
WDDLTRARADPASAGAGPDAGAVEGVMIKRGDSPYLPGRPKGPWWKWKRDPHTVDAVLMY
AQRGHGKRSSFYSDYTFGVWTQGEEGDVLVPVGKAYFGFTDEELKLIDAFVRRATINRFG
PVREVVHEKDEGLVLEVAFEGLARSTRHRSGIAMRFPRIARLRWDKPPGEADRLETLEAL
LR
NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt
atgaaccgcttcgccgccctgctcgaccgcatgtcctatgaagccgggcgcaacgccaag
atccggctgatggcggactatttccgcaccacgccggaccccgagcgcggcttcgccctc
gcggcgctcaccggcgcgctctccttcgccaacgccaagcccggcgtggtgcgcgccctc
atcatggagcgggccgacccggtgctgttcgagatgtcctacgattatgtgggcgacctc
tcggaaaccgtcgccctcatgtggccgaggctggaaggcgccccgacccacgcgccgctg
ctgtccgagatcgtccacggcctctccaccctctcccgctccaccctgccccgccgcctt
gccgactggctggacgggctggacgaaaccggccgctgggcgctgctgaagctcatcacc
ggcgccatgcgggtcggcgcctccgcccgcctcgccaagaccgcgttggcaagccttggc
agcgtcacgccggacgaggtggaactggtatggcccggcctcgcgccaccctatgaagag
ctgttcgcctgggtggaaggtcatgggccgcggcccgagacctccaaccccgcgccgttt
cgcccggtgatgctggcccacgccatcgaggaagccaatttcgccgaccttgcccccggc
gatttcagcgccgaatggaagtgggacggcatccgcgtgcaggcggtggccggcaccggg
gcggatggggtgcgggcggtgcggctttattcccgcaccggtgaggacatctccgaggct
tttcccgatctggcggacgccatcgcctttaacggcgccatggacggggagttgctgatc
gtccgcgcggggcgggtggagccgttcaacgtgctccagcagcggctcaaccgcaaaagc
gtgacggtgaagatgctggcggaatttcccgcccacatccgtgcctacgatttgctggtc
gatggcgacgaggacctgcgcgccctgcccttcaccgcgcggcgggcgcggctggaggcg
ctggtgacccggctgtcgtcgccgcgcatcgacctctccccgctggtgcccttcgccggc
tgggatgacctcacccgcgcccgcgcggaccccgcatccgccggcgcggggccggacgcc
ggcgcggtggaaggggtgatgatcaagcgcggcgacagtccctacctgcccggccgtccc
aaggggccgtggtggaaatggaagcgcgatccgcacacggtggacgccgtgctcatgtat
gcccagcgcggccacggcaagcgctcgtccttttattccgactacaccttcggggtgtgg
acgcagggcgaggagggcgatgttctggtgcccgtgggcaaggcctatttcggcttcacc
gacgaggagctgaagctgatcgacgccttcgtgcggcgcgccaccatcaaccgcttcggc
ccggtgcgggaagtggtgcatgagaaggacgaggggctggtgctggaagtggccttcgag
ggcctcgcccgctccacccgccaccgctccggcatcgccatgcgcttcccccgcatcgcg
cgcctcaggtgggacaagccgccgggcgaggccgaccggctggagacactggaggcgctg
ctgaggtag

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