KEGG T01616: XACM

Xanthomonas axonopodis pv. citrumelo F1: XACM_0004

Entry

XACM_0004         CDS       T01616

Symbol

recF

Name

(GenBank) recombination protein F

K03629

DNA replication and repair protein RecF

Organism

xax Xanthomonas axonopodis pv. citrumelo F1

Pathway

xax03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:xax00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    XACM_0004 (recF)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xax03400]
    XACM_0004 (recF)
DNA repair and recombination proteins [BR:xax03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     XACM_0004 (recF)

SSDB

Motif

Pfam:

SMC_N AAA_23 AAA_21 AAA_15 AAA_29 AAA_27 ABC_tran AAA_25 AAA_16 AAA_13

Other DBs

NCBI-ProteinID:

AEO40315

Position

3799..4905

AA seq 368 aa
MHVVRLSIHRLRRFHTVELHPSSTLNLLTGDNGAGKTSVLEALHLMAYGRSFRGRVRDGL
IQQGANDLEVFVEWKEGNGAAGERTRRAGLRHSGQEWTGRLDGEDVAQLGALCAALAVVT
FEPGSHVLISGGGEPRRRFLDWGLFHVEPDFLTMWRRYARALKQRNALLKQGAQPRMLDA
WDHELAESGESLTSRRTRYLERLQERLVPVADAIAPALGLSALTFAPGWKRHEVSLADAL
LLARERDRQNGYTSQGPHRADWVPSFQALPGRDALSRGQAKLTALACLLAQAEDFAYERG
EWPVIALDDLGSELDRHHQGRVLQRLACAPAQVLITATETPPGLADAGARLQQFHVEHGH
ITRQAAAH

NT seq 1107 nt +upstreamnt +downstreamnt
atgcatgtagtgcggttgtccattcatcggcttcgccggtttcacacggtcgagcttcat
ccctccagtaccttgaatctgctgaccggcgacaacggtgcggggaagaccagcgtgctc
gaagcgctgcatctgatggcctacggccgcagcttccgcgggcgcgtccgtgacggcctg
atccaacaaggcgccaacgaccttgaagttttcgtggaatggaaagaaggcaacggcgct
gcgggcgaacggacgcgtcgagccggcctgcgtcatagcgggcaggaatggacgggacgt
ctggatggtgaagacgtggcgcagcttggcgcgctttgcgctgcgctggcagtggtgacg
ttcgagcccggcagccacgtgctgatcagtggcggtggcgaacctcgccgccgcttcctg
gattggggcctgttccacgtggaacccgatttcctcaccatgtggcgccgctacgcccgg
gcgctcaagcaacgtaatgcgttgctgaagcagggagcgcagccacgcatgttggacgcc
tgggaccacgaactcgccgaatccggcgagagcctgacgtctcggcgcacgcgctacctg
gaacgcctgcaggagcggctggttcccgtggcagatgcgatcgcgcccgcgctgggactg
tctgcgctgacgttcgctcccggctggaagcgccacgaggtctcgctggcagacgccctg
ctgcttgcgcgcgaacgagatcgccagaacggctacacctcgcaaggcccgcaccgggca
gattgggtgcccagctttcaggcactccctggacgggacgcgctttcccggggacaggcc
aagctcaccgccctcgcctgcctgctcgcacaggcggaggacttcgcctacgaacgcggc
gagtggccggtcatcgccctggatgatctgggctcggagctggaccggcaccatcagggg
cgtgtgctgcagcggctcgcgtgcgcgccggcacaggtgctcatcaccgcaaccgaaacc
ccgcctggccttgcagatgccggcgcacgattgcagcagttccacgtggaacacggccac
attacgcgacaggcagcggcccactga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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