KEGG   Xenorhabdus bovienii SS-2004: XBJ1_3421
Entry
XBJ1_3421         CDS       T01186                                 
Symbol
lysS
Name
(GenBank) lysine tRNA synthetase, constitutive
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
xbo  Xenorhabdus bovienii SS-2004
Pathway
xbo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:xbo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    XBJ1_3421 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:xbo01007]
    XBJ1_3421 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xbo03016]
    XBJ1_3421 (lysS)
Enzymes [BR:xbo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     XBJ1_3421 (lysS)
Amino acid related enzymes [BR:xbo01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   XBJ1_3421 (lysS)
Transfer RNA biogenesis [BR:xbo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    XBJ1_3421 (lysS)
 Prokaryotic type
   Other AARSs
    XBJ1_3421 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: CBJ82539
UniProt: D3V4G0
Position
complement(3325049..3326563)
AA seq 504 aa
MSQQQQGAEQAPDLNNELKTRREKLVALRGNGIAFPNDFRRENISEDLHAKYDDKTQEEL
EALNIEVTVAGRMMTRRIMGKASFATLQDMGGRIQVYVSRDDLPEGIYNEQFKKWDLGDI
LGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLADQEMRYRQRYLDLISNDESR
KTFQIRSRIMAALRNFMVKKDFMEVETPMMQAIPGGASARPFTTHHNALDIDMYLRIAPE
LYLKRLVVGGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTL
TQEVLGTTLVKYGEQEFDFGKPFTKMSMKEAICKYRPETNIADLDDMDKAVAIAKSLGID
IEKSWGLGRIQCEIFEETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGR
EIGNGFSELNDAEDQAERFAEQVRHKDEGDDEAMFYDDDYVTALEHGLPPTAGLGIGIDR
MVMLFTDSHTIRDVILFPAMRPNK
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtcacaacagcagcagggagctgaacaggctcctgatttaaataatgaactgaaaact
cgccgtgaaaaactggttgcactgcgcggcaacggtatcgcattcccaaatgattttcgt
cgtgaaaacatttctgaagatctgcatgcaaaatatgatgacaagactcaggaagaactg
gaagcgctgaacattgaagtgaccgtagcaggccgtatgatgactcgtcgtatcatgggc
aaggcatcctttgcgaccttgcaggacatgggaggacgtattcaggtttacgtttcccgt
gatgacctgccggaaggcatttataatgaacagttcaaaaaatgggatttgggtgacatt
ttaggcgctcgcggtaaattgtttaaaaccaaaacgggtgaactttccattcactgtact
gaactgcgcttgctgaccaaagcactgcgtccgctgccggataaattccacggcttggcg
gatcaggaaatgcgctaccgtcagcgttatttggatctgatctcgaatgacgaatcacgc
aagacattccagatccgttcccgcatcatggctgcattgcgtaacttcatggtcaaaaaa
gacttcatggaagttgaaactccaatgatgcaggcgatccctggcggagcgagtgcgcgc
ccatttactacgcaccacaacgcgctggacatcgatatgtacctgcgcattgcaccggaa
ctgtatctgaaacgtctggtagtgggtggttttgagcgcgttttcgaaatcaaccggaac
ttccgtaacgaaggtatttctccgcgtcataacccagagttcaccatgatggaactctac
atggcttatgcggattaccaagatctgatcgtactgaccgaagaactgttccgtactctg
actcaggaagtgctgggtactacgttggttaaatacggtgaacaagaattcgatttcggt
aagcctttcaccaaaatgtccatgaaagaagcgatctgcaaatatcgcccggaaaccaat
atcgcggatctggatgatatggataaagctgtcgctatcgcgaagtctcttggtattgat
attgaaaaaagttggggcttgggtcgtattcagtgtgaaatatttgaagaaactgctgaa
agccacctgattcaaccgactttcattactgaatacccagcagaagtttctccgctggca
cgccgtaatgatgataacccattcattacagaccgttttgaattctttatcggtggccgt
gaaattggtaacggcttctccgaactgaacgatgcagaagatcaggcagaacgttttgca
gagcaagttcgtcataaagatgaaggtgacgacgaagcgatgttctatgatgatgactac
gttactgcactggaacacggtttaccaccaacagcaggtttggggattggtatcgaccgt
atggttatgctgttcacggatagccataccatccgtgacgtgatcctgttcccagcaatg
cgcccgaataaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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