KEGG   Xanthomonas campestris pv. campestris B100: xcc-b100_0004
Entry
xcc-b100_0004     CDS       T00759                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
xca  Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:xca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xca03032]
    xcc-b100_0004 (gyrB)
   03400 DNA repair and recombination proteins [BR:xca03400]
    xcc-b100_0004 (gyrB)
Enzymes [BR:xca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     xcc-b100_0004 (gyrB)
DNA replication proteins [BR:xca03032]
 Prokaryotic type
  DNA Topoisomerases
   xcc-b100_0004 (gyrB)
DNA repair and recombination proteins [BR:xca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      xcc-b100_0004 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook Toprim_4 SMC_hinge
Other DBs
NCBI-ProteinID: CAP49332
UniProt: A0A0R4J729
Position
4831..7275
AA seq 814 aa
MTDEQTTPPTPNGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDE
ALAGHADDIVVKIHVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYK
VSGGLHGVGVSVVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFK
PAVEIFSDVEFHYDILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLA
QLKTPLHPNVISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGALT
RVLSNYIEQNGIAKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVE
NAFGARLQEFLQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADC
QEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTL
ITALGTGIGRDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIG
LPPLYKLKQGKSELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFAGA
KEAIARNAHRYDPALLTALIDLPPLDVVQLQAEGDVHPTLDALQAVLNRGTLGTARYHLR
FDPATDSAAASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQILRG
NKSHPITSFAQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDA
VAADQIFSTLMGDVVEPRRDFIEDNALKVSNLDI
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaccgacgaacaaaccacaccgccaacacccaacggcacctacgactccagcaagatc
accgtgctgcgtggcctcgaagccgtccgcaagcgccccggcatgtacatcggcgatgtg
cacgacggcaccggcctgcaccacatggtgttcgaggtggtcgacaattcggtcgacgag
gccctggcgggccacgccgatgacatcgtggtcaagatccacgtggatggctcggtagcg
gtgtcggacaacggccgcggcgttccggtggacatccacaaggaagaaggcgtttccgca
gccgaggtgatcctcaccgtgctgcacgccggcggcaagttcgacgacaacagctacaaa
gtgtccggcggcctgcacggcgtgggcgtctcggtggtcaacgcgctgtccgagcacctg
tggctggatatctggcgcgacggcttccactaccagcaggaatatgcgctgggtgagccg
cagtacccgctcaagcagctggaagcctcgaccaagcgcggcaccacgctgcgcttcaag
ccggcggtggagatcttcagcgacgtcgagttccattacgacatcctggcgcgccgccta
cgcgagctttcgttcctcaactccggcgtcaagattgcgctgatcgacgagcgcggcgaa
ggccggcgcgacgatttccactacgaaggcggcattcgcagcttcgtggagcatctggcc
cagctcaagaccccgctgcacccgaacgtgatttcggtgaccggcgagcacaacggcatc
gtggtggacgtggccctgcaatggaccgacgcctaccaggaaaccatgtattgcttcacc
aataacatcccgcagaaggatggcggcacgcatctggccggcttccgcggcgcgttgacg
cgcgtgctgagcaactacatcgagcagaacggcatcgccaagcaggcaaagatcaccctg
accggcgacgacatgcgcgaaggcatgatcgcagtgctgtcggtgaaggtgcccgacccc
agcttctcctcgcagaccaaggaaaaactggtcagctcggacgtgcgcccggcggtggaa
aatgccttcggtgcgcgcctgcaggaattcctgcaggaaaatccgaacgaagccaaggcc
atcaccggcaagatcgtcgatgccgcccgtgcccgtgaagccgcccgcaaggcgcgcgat
ctgacccgccgcaagggcgcgctggatatcgccggcctgccgggcaagctggccgattgc
caggaaaaggatccggcgctgtccgagctgttcatcgtcgagggtgactcggcaggtggc
tcggccaagcagggccgcaaccgcaagaaccaggcggtgctgccgctgcgcggcaagatc
ctcaacgtcgaacgcgcgcgcttcgatcgcatgctggcctccgaccaggtgggcacgctg
atcaccgcgctgggcaccggcatcggccgcgacgagtacaacccggacaagctgcgctac
caccgcatcatcctgatgaccgacgccgacgtggacggctcgcacatccgcacgctgctg
ctcacgttcttctaccggcagatgccggagctgatcgagcgcggctacatctacatcggc
ttgccgccgctgtacaagctcaagcagggcaagagcgagctgtatctcaaggacgacgcc
gcgctcaacgcctacctggccagcagcgcggtcgaaggtgcagcgctgatcccggccagc
gacgagccgccgatcaccggcgaggcgctggaaaaactgctgctgttgttcgctggcgcc
aaggaggccattgcccgcaatgcccaccgctacgacccggcgctgttgaccgcgttgatc
gatctgccgccgctggacgtggtgcagctgcaggccgaaggcgacgtgcatcccacgctg
gatgcgctgcaggcagtgctcaatcgcggcaccctgggcacggcgcgctatcacctgcgc
ttcgacccggccaccgacagtgccgccgcctcgctggtgtcggtgcgcaagcacatgggc
gaggaattcacccaggtgctgccgatgggcgcgttcgaaagtggtgagctgcgtccgctg
cgcgaggttgcgctggccctgcatggcttggtgcgcgaaggcgcgcagatcctgcgtggc
aacaagagccacccgatcaccagctttgcgcaggcgcaggcctggctgctggaagaagct
aagcggggccgccaggtgcagcgcttcaagggcctgggcgaaatgaacgccgagcagttg
tgggaaaccacggtcaatccggacacgcggcgcctgctgcaggtgcgcattgaagacgcc
gtggcggccgaccagatcttcagcaccttgatgggcgatgtggtggaaccgcgccgcgac
ttcatcgaggacaacgcgctgaaggtttccaacctggatatctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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