KEGG   Xanthomonas campestris pv. campestris B100: xcc-b100_1966
Entry
xcc-b100_1966     CDS       T00759                                 
Name
(GenBank) putative pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
xca  Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:xca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xca03009]
    xcc-b100_1966
Enzymes [BR:xca01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     xcc-b100_1966
Ribosome biogenesis [BR:xca03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    xcc-b100_1966
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: CAP51319
UniProt: B0RS84
Position
complement(2290182..2291798)
AA seq 538 aa
MSDTPRKLSLNKLSLKRDSAPEAPKLEERLHKVLAQAGLGSRRALEQRIADGLIKVNGAV
AQTGMSVRSGDKIELDGRSFVASALTESSRVLVYNKPEGEVTTREDPEGRPTVFESLPAL
KGSRWIAIGRLDINTTGLLLLTTDGELANAMMHPSYEVEREYVVRVRAPEGEEKVPDSMI
ERLSRGVLLEDGGAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRT
RYGKVSLPRELLRGQSVELAQEKVDALRAELKLEEGAPSALTLQPVIGQRRAAKSTVHVS
RDGRSNAYVNGQTSGADEGRELRRFDNLREDRGGRGGRGKPGGFKGGLTVSGEAAAKQSQ
QRPFKQRGPAKGDRSLPDGNPAAFRSWYVPDGVSTGPSGHRNAGPGGAGTGQPRPYAKKG
PGGARPGAGGQGRGAAGGQGQSQGQGQGQRKHPYGHPGNAPSFPSDHANPGFSPYGAARP
AAGRPTGARAGGPGGNRGPGGNRGPGGPGGAPRGPGGPGGRPPGGGNRRPPGGGNRGR
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgagtgacaccccccgcaagctgtcgttgaacaagctttccctcaagcgcgacagcgcg
cccgaagcgccgaaactggaagagcgcctgcacaaggtgctggcccaggccggcctgggc
tcgcgccgcgcgctggagcagcgcattgccgatggcctgatcaaggtcaatggcgccgtc
gcgcagaccggcatgtcggtgcgcagcggcgacaagatcgaactggacggccgcagcttc
gtcgccagcgcgctgaccgaatcctcgcgcgtgctggtctacaacaagcccgaaggcgaa
gtgaccacccgcgaagatcccgaaggccgcccgaccgtattcgagtcgctgccggcgctg
aagggctcgcgctggatcgctatcggccgcctggacatcaacaccaccggcctgctgctg
ctcaccaccgatggcgagctggccaacgcgatgatgcacccctcctacgaggttgaacgc
gagtacgtggtgcgcgtgcgcgccccggaaggcgaagagaaggtgcccgacagcatgatc
gagcggctttcgcgcggcgtgttgctggaagacggcggcgccaagttcgacgagatcgaa
cgtatcggtggcaccgattcgcacgactggttccgcgtggtggtcaaggaaggccgtaac
cgcgaagtgcgccgcctgtgggagtcgcaaggctgccaggtcagccgcctcaagcgcacc
cgctacggcaaggtgtcgctgccgcgcgagctgttgcgcgggcaatcggtggaactggca
caggaaaaggtcgacgccctgcgcgccgaactcaagctggaagaaggcgcgccgtcggca
ttgacgctgcagccggtgatcggccagcgccgcgccgccaagtcgaccgtgcacgtgtcg
cgcgacggccgcagcaatgcctacgtcaacggccagacctccggcgccgatgaaggccgt
gagttgcgccgcttcgacaacctgcgcgaggatcgcggcggccgtggtggccgcggcaag
cccggcggcttcaagggcggcctgacggtcagcggcgaagccgctgccaagcaatcgcag
cagcgcccgttcaagcagcgtggcccggccaagggcgaccgctcgctgccggacggcaac
ccggccgcgttccgcagctggtatgtgcccgatggcgtgagcaccggcccgagcggccac
cgcaacgcaggtcccggcggcgccggcaccggccagccgcgtccctacgccaagaagggt
ccgggcggcgcacgcccgggcgcaggcggccagggccgcggcgcggcaggtgggcaaggt
cagtcgcagggtcaaggtcagggccagcgcaagcacccctacggccacccgggcaacgcg
ccgagcttcccgtccgatcacgccaacccgggtttcagcccgtatggtgccgcacgtccg
gcagctgggcgcccgaccggtgcgcgtgcaggcggccccggcggcaaccgtggaccaggc
ggtaatcgtggtcccggtggtccgggcggcgcaccgcgtggcccaggtggtccgggtggt
cgtcccccgggtggcggcaaccgtcggccaccaggtggcggcaatcgcggtcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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