KEGG   Xanthomonas campestris pv. campestris B100: xcc-b100_2048
Entry
xcc-b100_2048     CDS       T00759                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase (ubiquinone) flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
xca  Xanthomonas campestris pv. campestris B100
Pathway
xca00020  Citrate cycle (TCA cycle)
xca00190  Oxidative phosphorylation
xca00650  Butanoate metabolism
xca01100  Metabolic pathways
xca01110  Biosynthesis of secondary metabolites
xca01120  Microbial metabolism in diverse environments
xca01200  Carbon metabolism
Module
xca_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xca_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xca_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:xca00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    xcc-b100_2048 (sdhA)
   00650 Butanoate metabolism
    xcc-b100_2048 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    xcc-b100_2048 (sdhA)
Enzymes [BR:xca01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     xcc-b100_2048 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Thi4 Pyr_redox_2 GIDA FAD_binding_3
Other DBs
NCBI-ProteinID: CAP51401
UniProt: A0A0R4J6V4
Position
2385570..2387360
AA seq 596 aa
MSAYKITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEEGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMAEGSLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPEVINDKLPGIAESAHIFAGVDVAKQPIPVLPTVHYNM
GGIPTNYHGEVVRKQGDNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETVKTNQPHKPLPSDACDKALGLLDKLRHANGSTPTSVIRDNMQRTMQSDAAVFRTS
KTLKEGVDKMAEIFATFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDFPDRDDVNWQKHTLVTVDDKGQCDFEYRPVHMYTLSKEVDVVPPKPRVY
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgtccgcttacaagattacagaacacaagtacgacatggtcgtggtgggcgccggcggc
gccggcttgcgcgcgaccttcggcctggcccagaagggcctgcagacggtctgcctgacc
aaggtcttcccgacccgttcgcacaccgtggccgcgcagggtggtatttccgccgcgctg
ggcaatatgggtgaggacgactggcggtatcacttctacgacaccatcaagggctccgat
tggctgggcgaccaggacgcgatcgagtacatgtgccgtgaggcgatcccggccatcatc
gagctcgagcactacggcgtgccgttctcgcgcaccgaagagggcaagatctaccagcgc
ccgttcggcggcatgaccaccaagtacggcgaaggtccgtctgcgcagcgcacctgcgcc
gccgccgaccgcaccggtcacgcaatgctgcatacgttgtaccagcagtcgctggcgcac
aacgcacgcttcatgatcgagtacttcgcgctcgacctgattttcgacgaagaaggtgtg
tgccgcggcgtgctcgcgctggacatggccgaaggttcgctgcacctgttccgcgcccac
ggcgtggtgctggccaccggcggctacggccgtgcctacttcagcgccacctctgcccac
acctgtaccggtgacggcggcggcctggtgatgcgtgctggcctgccgatgcaggacatg
gagttcgtgcaattccatcccaccggtatctacggtgcgggctgcctgatcaccgaaggc
gtgcgtggcgaaggcggcatcttgcgcaacagcaacggcgagcgcttcatggagcgctat
gcaccgcactacaaggatctggcctcgcgcgacgtggtgtcgcgttcgatgaccatcgag
atccgcgaaggccgtggcgttggcgagcacaaggaccacattctgctcgacctgacccac
ctcggcccggaagtgatcaacgacaagctcccaggcatcgccgagagcgcgcacatcttc
gctggcgtggacgtggccaagcagccgatcccggtgctgccgacggtgcactacaacatg
ggcggcatcccgaccaactaccacggtgaagtcgtgcgcaagcagggcgacaacccggat
gcggtggtgcccggtttgtatgcgatcggcgaagcggcttgcgtgtcggtacatggcgcc
aaccgtctggggtccaactcgctgctggatctggtggtgtttgggcgtgcggtagccaac
cgctgcgcggaaaccgtcaagaccaatcagccgcacaagccgctgccgtccgatgcctgc
gacaaggcgctgggcttgctggacaagttgcgccatgccaatggctccacgccgacctcg
gtgatccgcgacaacatgcagcgcaccatgcagtcggacgcagcggtgttccggaccagc
aagacgctgaaggaaggcgtcgacaagatggccgagatcttcgccaccttcgaggacgtc
aaggtatcggaccgctcgctggtctggaattcggacctgatcgagacctacgagttgaac
aacctgctgctcaatgcagtggcgacgatcaactcggccgaacagcgcaaggaaagccgt
ggcgcgcacgcgcacgaggatttcccggaccgcgacgacgtcaactggcagaagcacaca
ctggtcaccgtggacgacaagggccagtgcgacttcgaataccgcccggtccacatgtac
acgctgagcaaggaagtggacgtggttccgccgaagccgcgcgtctactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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