KEGG T00759: xccb100

Xanthomonas campestris pv. campestris B100: xccb100_3965

Entry

xccb100_3965 CDS T00759

Gene name

icd2

Definition

isocitrate dehydrogenase (NADP(+)) (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

xca Xanthomonas campestris pv. campestris B100

Pathway

xca00020	Citrate cycle (TCA cycle)
xca00480	Glutathione metabolism
xca01100	Metabolic pathways
xca01110	Biosynthesis of secondary metabolites
xca01120	Microbial metabolism in diverse environments
xca01210	2-Oxocarboxylic acid metabolism
xca01230	Biosynthesis of amino acids

Module

xca_M00009	Citrate cycle (TCA cycle, Krebs cycle)
xca_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:xca00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:xca00480]

SSDB

Motif

Pfam:

IDH Pectate_lyase

Other DBs

NCBI-GI:

188993360

NCBI-GeneID:

6323772

UniProt:

B0RWU3

Position

complement(4485860..4488091)

AA seq 743 aa
MSKTPKIIYTLTDEAPFLATQSLLPIIDAYTDTAGIVVETRDISLAGRILALFPEQLTDA
QKIADDLAELGALATTPEANIIKLPNISASVPQLKAAIKELQSQGYALPAYPDEPKDAAE
QDIKTRYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSESKSHVAHMDNG
DFFGSEQSTTLAQAGTLKIEFVGADGSSKVLKDAVAVKAGEIVDAAVLSKRALASFIDAQ
IADAKAKDVLFSVHLKATMMKVSDPVLFGVVVGEFYKSALSKHADVLKSVGFDPNNGIGD
LYARIGTLPDDVQAQIKADVQAEYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGQMWNAQGKLQDTKAVIPDRCYAGVYQAVIDDCKAHGAFDPSTMGSVPNVGLMAQKAEE
YGSHDKTFQMAAAGTVKVTDGNGSTVFEHAVEAGDLWRMCQVKDAPIQDWVKLAVERARL
SDTPAVFWLDKARAHDAQVIAKVETYLKDHDTNGLDIRILPPVEATTFSLERIRKGQDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENCL
RWDSLGEFLALAASLEHLGNRYDNPSATVLAKALDVANGQFLDNNKSPARKVGELDNRGS
HFYLAMYWAQALAAQTEDTALQAKFAPLAKALTENEATIVAELNGAQGKPVEIGGYYHPD
LAKVSEAMRPSKTFNDVLATLKA

NT seq 2232 nt +upstreamnt +downstreamnt
atgtcgaagacaccgaagatcatctacacgctcaccgacgaagcacccttcctggccacg
cagtcgctgctgccgatcatcgatgcctacaccgataccgccgggatcgtggtcgagacc
cgcgacatttcgctggccggacgcatcctggccctgttcccggagcaactgaccgacgcg
cagaaaattgccgacgatctggccgaactgggcgcgctggccaccacgcccgaagccaac
atcatcaagttgcccaacatcagcgcctcggtgccgcagctcaaggccgcgatcaaggaa
ctgcagagccagggctacgcgttgccggcgtatccggatgaacccaaggatgccgccgag
caggacatcaagacgcgctacgacaaggtcaagggcagtgcggtgaatccggtgctgcgc
gaaggcaattccgatcgccgcgcaccgctgtcggtgaagaactatgcacgcaagcatccg
caccgcatgggcaagtggagcagcgagtccaagtcgcatgtggcgcacatggacaacggc
gacttcttcggcagcgaacagtccaccacgctggcgcaggccggcacgctgaagattgaa
ttcgtcggtgccgacggcagcagcaaggtgctcaaggacgccgttgcagtgaaggccggc
gagatcgtcgatgccgccgtgctgagcaagcgcgcactggccagtttcattgatgcgcag
atcgccgacgcgaaggccaaagacgtgctgttctcggtgcatctgaaagccaccatgatg
aaagtttccgacccggtgctgttcggcgtggtcgtgggtgagttttacaagagtgcgttg
agcaagcacgccgatgtgctgaagtcggttggcttcgaccccaacaacggtatcggtgat
ctgtacgcacgcatcggcacgctgccggatgacgtgcaggcgcagatcaaggccgacgtg
caggccgagtacgcccagcgcccggggttggcaatggtcaactcggacaagggcatcacc
aatctgcacgtgcccagcgacgtgatcgtcgacgcatcgatgccggcgatgattcgcgat
tccggccagatgtggaatgcgcaaggcaagctgcaggacaccaaggccgtgatcccggac
cgctgctatgccggcgtgtaccaggcggtgatcgacgactgcaaggcgcatggcgcgttc
gatccctccacgatgggctcggtgcccaacgtcggcctgatggcgcagaaggccgaagaa
tacggctcgcacgacaagaccttccagatggccgccgctggcaccgtcaaggtcaccgat
ggcaacggcagcaccgtgttcgagcacgctgtggaagccggtgatttgtggcgcatgtgc
caggtcaaggacgcgccgatccaggattgggtgaagctggcggtcgagcgcgcccgtctg
agcgacaccccggccgtgttctggctggacaaggcacgcgcgcacgacgcgcaggtcatc
gccaaggtcgaaacttacttgaaggatcacgacaccaacggcctggacatccgcatcctg
ccgccggtggaggccaccaccttctcgctggagcgcatccgcaagggccaggacaccatc
tcggtcaccggcaacgtgctgcgcgactacctcaccgacctgttcccgatcatggagctg
ggcaccagcgccaagatgctctcgatcgtgccgctgatggccggtggcgggctgttcgag
accggcgccggtggttcggcgcccaagcacgtacagcagttcgtcgaagagaactgcctg
cgctgggattcgctgggtgagttcctggccctggctgcctcgctcgagcacctgggcaac
cgttacgacaacccgtccgccaccgtgctggcgaaagcgctggacgtggccaacgggcag
ttcctggacaacaacaagtcgccggcgcgcaaggttggcgagctcgacaaccgcggcagc
catttctatctggcgatgtactgggcacaggccctggccgcacagaccgaagacaccgcg
ttgcaggccaagttcgcgccgctcgccaaggccttgaccgagaacgaagccaccatcgtg
gccgagctcaacggcgcacagggcaagccggtggagatcggtggctactaccatccggat
ctggccaaggtcagcgaggcgatgcgtccgagcaagaccttcaacgacgtgttggccacg
ctcaaggcctga

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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