KEGG   Xanthomonas campestris pv. campestris 8004: XC_2968
Entry
XC_2968           CDS       T00247                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:xcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xcb03019]
    XC_2968
   03009 Ribosome biogenesis [BR:xcb03009]
    XC_2968
   03036 Chromosome and associated proteins [BR:xcb03036]
    XC_2968
Enzymes [BR:xcb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     XC_2968
Messenger RNA biogenesis [BR:xcb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     XC_2968
Ribosome biogenesis [BR:xcb03009]
 Eukaryotic type
  90S particles
   RNase
    XC_2968
 Prokaryotic type
  rRNA processing factors
   XC_2968
Chromosome and associated proteins [BR:xcb03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     XC_2968
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AAY50016
UniProt: Q4USF7
Position
complement(3552664..3553344)
AA seq 226 aa
MSNRTFQRGDPIGHAFADPGLLAQALRHRSAGTPHNERLEFLGDGIVNLLIAEALYQRWP
KADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVA
AIYLDCGFERCRAVVLPWFEPSLAALPVGKAEKDPKTRLQEWLQARQLPLPQYALISESG
DEHAKQFHVACILEQPAARAEGQGTSRRLAEQQAAATVIAQLDSNT
NT seq 681 nt   +upstreamnt  +downstreamnt
gtgtcgaatagaactttccagcgcggtgatccgatcggacatgcgtttgccgatccgggt
ctgctcgcccaggcgctgcgtcatcgcagcgccgggacgccgcataacgagcgtctggaa
ttcctgggcgatggcatcgtcaatctgctgatcgccgaggcgttgtatcagcgctggccc
aaggccgatgaaggcgccttgacccgtgcgcgcgccgagctggtgcgcgagggcgcgctg
gccgtcattgggcgcaccctcaacctgggcgagcgcttgacgctgggcccgggcgaattg
aaatccggcgggcatcgccgcgattcgatcctggccgacgcggtcgaagcgatcgtcgcg
gcgatctatctggactgcgggttcgagcgttgccgcgcggtggtgctgccctggttcgaa
ccgtcgctggccgcgttgccggtcggcaaggccgagaaagatcccaagacccggctgcag
gaatggctgcaggcacggcaattgccattgccgcagtacgccctgatcagcgaaagcggc
gacgaacacgccaagcagttccatgtcgcctgcatccttgagcagccagccgcccgcgcc
gaggggcagggcacgtctcgtcggcttgccgagcaacaggccgcagccaccgtcatcgca
caactggattcgaacacgtga

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