KEGG   Xanthomonas campestris pv. campestris 8004: XC_4239Help
Entry
XC_4239           CDS       T00247                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:xcb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    XC_4239
Enzymes [BR:xcb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     XC_4239
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     XC_4239
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(5018365..5019180)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIAAQIEQLLPGATITDVRRRAKYL
LIDTDAGGSAVLHLGMSGSLRVLPGDTPPRAHDHVDISLQNGRVLRFNDPRRFGCLLWQR
DCETHELLASLGPEPLSAAFTGDYLHALACGRRAAVKTFLMDQAVVVGVGNIYAAESLHR
AGISPLREAGKVSRERYRRLADAVKEILAYAIQRGGTTLRDFISPDGAPGYFEQELMVYG
REGEACRHCGGELKHATIGQRATVWCAACQR
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagcttcccgaagtcgaaaccaccctacgtggactggccccgcacctggtgggg
caacgcatccatggcgtgatcctgcggcggcctgacctgcggtggccgattgcagcgcag
atcgaacagttgctgccaggcgccacgattaccgatgtgcgtcggcgggcgaagtatctg
ctgatcgataccgatgcaggcggcagtgccgtgctgcatttagggatgtcgggcagcctg
cgggttttgccgggcgatacgccaccacgtgcgcacgaccatgtggatatcagcctgcag
aacgggcgtgtcctgcggttcaatgacccacgccgctttggttgcctgttatggcagcgc
gattgcgaaacgcatgagctgctggccagccttgggcccgaaccattatctgccgcattt
acgggcgattatctgcacgcattggcatgcggtcgccgtgcggcggtcaagaccttcttg
atggaccaggcggtggtggtcggcgttggcaatatctatgcggcagaaagcctgcatcgc
gcaggaatcagcccgctgcgggaagctggcaaggtgtcgcgggagcgctatcgacggctg
gcggatgcggtgaaggaaatcctggcctatgcaatccagcgcggtggaaccacgctgcgc
gatttcatcagcccggacggcgcgcccggttatttcgagcaggaactgatggtgtatggc
cgcgaaggcgaagcctgcagacactgcggtggcgagttgaagcacgccacaatcggccaa
cgcgccacggtgtggtgtgcggcttgccagcgctag

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