KEGG   Xanthomonas campestris pv. campestris ATCC 33913: XCC0275
Entry
XCC0275           CDS       T00083                                 
Symbol
hrpB
Name
(GenBank) ATP-dependent RNA helicase
  KO
K03579  ATP-dependent helicase HrpB [EC:5.6.2.6]
Organism
xcc  Xanthomonas campestris pv. campestris ATCC 33913
Brite
KEGG Orthology (KO) [BR:xcc00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    XCC0275 (hrpB)
Enzymes [BR:xcc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     XCC0275 (hrpB)
SSDB
Motif
Pfam: HrpB_C Helicase_C DEAD HA2_N
Other DBs
NCBI-ProteinID: AAM39594
UniProt: Q8PDR0
Position
complement(337514..340024)
AA seq 836 aa
MPRMSDPAFPISPLLPQIRDSLAAHPRLVLEAPPGAGKTTQVPLALLDAPWLAGRSIVML
EPRRVAARSAALFMARQLGEPVGETVGYRIRFENKTSARTRIEVVTEGILTRMLQDDPML
ERVGALLFDEFHERHLAGDLGLALALDVQSQVREDLRIVAMSATLDGERLASFLDAPRLS
SAGRSYPVEVAHFPARRDEALEPQTRRAVEHALATHPGDVLVFLPGQREIARVQAALQDA
LDPAMQLLPLHGELPVEAQSQVLQPDPQGRRRVVLATNVAESSVTLPGVRVVIDSGLARE
PHYDPNSGFSRLDVTSIAQASADQRAGRAGRVASGWAYRLWPQSQRLEPQRRAEITQVEL
TGLALELAAWGSDALRFVDAPPGGALAAARELLQRLGGLNAEGGITALGRRMLALATHPR
LAALLAQAGTPARLALACDLAALLEARHPLRQGGDGLAARWRALAAFRQGRTGADANRGA
LAAIDAAAKQWRRRLRCDATPPTSVEAHALGDLLSHAFPDRIAARHPTDPLRYLLANGRS
ARLFDHSDLRGEPWLVASELRYEAKDALLLRAAPVDEGYLRQSVPERFVQQDVVQWDADK
RALVARRQSSFDRIVLDSRPAGRVDPAQAAAALTEAVRQLGLDALPWTEGLRQWRARVVS
LRAWMPELGLPDLSDTALLASLDHWLRPAFAGKTRLDALDEASLGDALKAALPWERRQAI
DRHAPTRISVPSGMERAITYALDHDQQPLPPVLAVKLQELFGLAETPRVADGRIPLTLHL
LSPGGRPLQVTQDLKSCWATTYPDVKKEMKGRYPRHPWPDDPWTANATHRAKPRGT
NT seq 2511 nt   +upstreamnt  +downstreamnt
ttgccgcgcatgagtgaccccgcctttccgatttccccgctgctgccgcagatccgcgac
agcctcgccgcccatccgcgtctggtgctggaagcgccgcccggcgccggcaagaccacc
caggtgccgttggcgctgctggatgcgccctggctggcgggccgcagcatcgtgatgctg
gaaccgcgccgggtggccgcgcgcagcgccgcgctgttcatggcgcgccagctgggcgag
ccggtcggcgagaccgtgggctaccgcatccgctttgagaacaagacctccgcgcgcacg
cggatcgaggtggtcaccgagggcatcctgacccgcatgctgcaggacgacccgatgctg
gaacgcgtgggtgcgttgctcttcgacgaattccacgaacggcacctggccggcgacctg
ggcctggcgttggcgctggatgtgcagagccaggtgcgcgaggacctgcgcatcgtggca
atgtcggccacgctggatggcgagcgcctggccagttttctcgatgccccgcggctgagc
agtgccgggcgcagctacccggtggaagtggcgcattttccagcgcgccgcgacgaagcg
ctggagccgcagacccgccgcgcggtggaacatgcgctggccacgcatcctggcgacgtg
ctggtgttcctgcccggtcaacgcgagatcgcacgcgtgcaggcggccttgcaggacgct
ctggatccagcaatgcaactgctgccgctgcacggcgagctgccggtggaggcacaaagc
caggtgctgcagcccgacccgcagggccggcgccgcgtagtgctggccaccaacgtggcc
gagtcgtcggtgacgttgccgggcgtgcgcgtggtgatcgacagcgggctggcgcgcgag
ccgcattacgaccccaacagcggcttttcgcggctggatgtgaccagcatcgcgcaggcc
tcggccgatcaacgcgccggccgcgccgggcgcgtggccagcggctgggcctaccggctg
tggccgcaatcgcagcggctggagccgcagcgccgcgccgagatcacccaggtggaactg
accggcctggcgctggaactggccgcctggggcagcgatgcgctgcgcttcgtcgatgcc
ccgcccggcggcgcactggccgccgcgcgcgagctgttgcagcggctgggcggtttgaac
gcagagggcggtatcaccgcgttgggacggcggatgctggccctggccacgcacccgcgc
ctggccgcactgctggcacaggccggcacgccggcgcgactggcgctggcctgtgacctg
gccgcactgctggaagcccgccaccccctccgccagggcggcgacgggctggctgcgcgc
tggcgggcgctggccgcgttccgccagggccgcactggcgcggatgccaaccgcggtgcg
ctggccgcgatcgatgccgccgccaaacagtggcgccgccgcctgcgctgcgatgccacc
ccacccaccagcgtggaggcgcatgcgctgggcgatttgctctcgcatgcgtttccggac
cgcatcgccgcacgtcatcccactgacccgctgcgctacctgctggccaatggccgcagc
gcgcgcctgttcgaccacagcgacctgcgtggcgagccgtggctggtcgccagcgaattg
cgttacgaagccaaggacgccctgttgctgcgcgccgcaccggtggacgaaggctatctg
cgccagagcgtgcccgagcgcttcgtgcagcaggacgtggtgcagtgggatgccgacaaa
cgcgcactggttgcacggcggcagtccagcttcgaccgcatcgtgctggatagccgcccg
gccggccgcgtcgacccggcccaggccgccgccgcgctcaccgaggcggtccgccagctc
gggctggatgccttgccgtggacagaggggctgcgccagtggcgcgcgcgggtggtctcg
ctgcgcgcctggatgccggaactcggcctgccggacctctccgacaccgcactgctggcc
tcgctcgaccactggctgcgcccggcgtttgccggcaagacgcggctggatgccctggac
gaagcaagcctgggcgatgcactcaaggccgcgctgccctgggagcgccgccaggccatc
gaccgccacgcgcccacccgcatcagcgtgccctcgggcatggagcgtgccatcacctac
gcgctggatcacgaccagcagccgctgccgccggtgctggcggtcaagctgcaggagctg
ttcggcctggccgaaaccccacgcgtggccgatggccgcatcccgctcaccctgcacctg
ctctccccgggcggccggccgttgcaggtgacccaggacctgaagagctgctgggccacc
acctacccggacgtcaaaaaggaaatgaaaggccgctacccgcggcacccctggccagac
gatccctggaccgccaacgccacgcatcgggccaaacccaggggcacctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system