KEGG   Xylanimonas cellulosilytica: Xcel_1205Help
Entry
Xcel_1205         CDS       T01135                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
xce  Xylanimonas cellulosilytica
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:xce00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Xcel_1205
Enzymes [BR:xce01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Xcel_1205
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Xcel_1205
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1308073..1308969)
Genome map
AA seq 298 aa AA seqDB search
MPELPEVEGLVRFLDERSRGRTVAAADVGNIAALKTFDPPLTALVGATVRGWARHGKWLD
LRTFTFDDDADPHLLVHLSRGGWLRWYDQVPTTTVRPRLGGSARGAVIALRVRFDDGTGF
DLTEAGTQKRLAVHVVRDPRDVPQVATLGPEPLDPAFTVEALRALLGAKNQQVKGLLRDQ
GAIAGIGNAYSDEILHVARFSPFKLTRSFTPDDVARLHAAIVDTLTGAVAASSGKPAKEL
KDAKRAGMRVHGRTGQACPVCGDTVREVSFADRSLQYCATCQTGGQPLADRRLSRLLK
NT seq 897 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctgcccgaggtggaggggctcgtgcggtttctcgacgagcggtcgcggggg
cgcaccgtcgccgccgccgacgtcgggaacatcgccgcgctcaagacgttcgacccgccg
ctgacggcgctcgtcggcgcgacggtgcgcgggtgggcacggcacggcaagtggctcgat
ctgcggaccttcacgttcgacgacgacgccgacccccacctgctggtccacctctcgcgc
ggtggctggctgcgctggtacgaccaggtgccgacgacgacggtgcgcccgcggctgggc
ggctcggcgcgtggcgcggtcatcgcgctgcgggtgcggttcgacgacggcacggggttc
gacctcaccgaggcgggcacgcagaagcggctggccgtgcacgtggtgcgcgacccgcgc
gacgtcccgcaggtcgcgaccctcgggccggagccgctcgacccggcgttcacggtcgag
gcgctccgcgcgctgctcggggccaagaaccagcaggtcaagggcctgctgcgcgatcag
ggtgcgatcgccggcatcggcaacgcgtactcggacgagatcctgcacgtcgcgcggttc
tcgccgttcaagctcaccaggagcttcacgcccgacgacgtcgcccggctgcacgccgcg
atcgtcgacacgctcacgggcgcggtggcggcgtcgtcgggcaagccggccaaggagctc
aaggacgccaaacgggcgggcatgcgcgtgcacgggcgcacgggtcaggcatgcccggtg
tgcggcgacacggtccgcgaggtgtcgttcgcggaccggtcgctgcagtactgcgcgacg
tgccagacgggcggccagccgctggccgaccgccgcctgtcccgcctgctcaagtag

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