KEGG T01872: XCR

Xanthomonas campestris pv. raphani: XCR_1285

Entry

XCR_1285 CDS T01872

Definition

glycosyl hydrolase

Orthology

K01201

glucosylceramidase [EC:3.2.1.45]

Organism

xcp Xanthomonas campestris pv. raphani

Pathway

xcp00511	Other glycan degradation
xcp00600	Sphingolipid metabolism
xcp01100	Metabolic pathways

Class

Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:xcp00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:xcp00511]

SSDB

Motif

Pfam:

Glyco_hydro_30

Other DBs

NCBI-GI:

384426945

NCBI-GeneID:

12265968

UniProt:

G0CGU1

Position

1306777..1308096

AA seq 439 aa
MRVSTVDAPTAGHALTEKENSIFVNPQRRFQALLGIGGAITDSSAETFAKLPKQAQRQLL
TAYYDPDKGIGYTLARTTIHSSDFSSGSYTYIKEGDAALKTFSVQHDAKYRIPMLRQAIA
AAGGTLTTFASPWSAPAFMKDSNAMLKGGKLLPAYAQAWATYYTRFIAAYEKAGIPIWGI
SLQNEPMAVQTWESMLFSAEDERDFLKNHLGPTMAKAGYGDRKIIVWDHNRDMMVHRAHV
IFDDPEASKYAWGMGFHWYETWAGFAPMVENVAAVAQAYPDKHLLLTEAAVEKFDPAKLQ
HWPNGERYGTAIINDLNHGAVGWTDWNILLDEHGGPNHVGNYCFAPVHANTRTGEVIYTP
SYWYIGHFSKFIRPGAQRVSAASSRSNLATTAFVNSDGSLATVVMNATDVAIRYNLYVGD
ASSVLEIPAHAIQTVVLAQ

NT seq 1320 nt +upstreamnt +downstreamnt
atgcgtgtcagcactgtcgatgcgcccacggccggacatgcgttgaccgagaaagagaac
tccatcttcgtcaatccacagcggcggtttcaggcgttgctgggcattggtggggcgatc
accgactccagtgcggaaactttcgccaaactgcccaagcaggcgcagcggcaactgctc
accgcctactacgacccggacaagggcatcggctacacgctggcgcggaccaccatccat
agctcggatttcagcagcggcagctacacctacatcaaggaaggcgatgcggcgctgaag
accttttcggtgcagcacgatgcgaaataccgcattccgatgttgcgccaagccattgct
gcggccggtggcacgctcaccacgtttgccagcccgtggagcgcgccggccttcatgaaa
gacagcaacgccatgctcaagggcggcaagctgttgcccgcgtatgcgcaggcctgggcc
acgtactacacgcgcttcattgccgcgtatgaaaaggccggcatcccgatctggggcatc
agcctgcagaacgaaccgatggcggtgcagacctgggagtcgatgctgttctctgcggaa
gacgagcgcgacttcctcaagaatcatctgggcccgaccatggccaaggccggctatggc
gatcgcaagatcatcgtgtgggaccacaaccgcgacatgatggtgcaccgcgcgcatgtg
atcttcgacgatccggaggcttccaaatatgcgtggggcatgggcttccactggtatgaa
acctgggccgggttcgcgccgatggtggagaacgtggcggcggtggcgcaggcgtacccg
gacaagcacctgctgctcaccgaggcggcggtggaaaagttcgacccggccaagctgcag
cactggcccaatggcgagcgctatggcacggccatcatcaacgacctcaatcacggtgcg
gtgggttggacggactggaacatcctgctggacgagcacggtggccccaatcacgtgggc
aactattgctttgcgccggtgcatgccaacacgcgcaccggcgaggtgatctacacgccg
agctattggtatatcggccacttttccaagttcatccggcccggcgcgcagcgggtgagt
gcggcgagcagccgcagcaacctggccaccactgcgttcgtcaacagcgatggcagcctg
gcgacggtggtgatgaatgccacggatgtggcgatccgctacaacctgtatgtgggcgat
gcctccagcgtgctggagattccagcgcatgcgatccagacggtggtgctggcgcagtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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