KEGG   Xanthomonas campestris pv. raphani: XCR_1520Help
Entry
XCR_1520          CDS       T01872                                 

Definition
3-hydroxyacyl-CoA dehydrogenase
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
xcp  Xanthomonas campestris pv. raphani
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Class
Metabolism; Overview; Carbon metabolism [PATH:xcp01200]
Metabolism; Overview; Fatty acid metabolism [PATH:xcp01212]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:xcp00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:xcp00650]
Metabolism; Lipid metabolism; Fatty acid degradation [PATH:xcp00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:xcp01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:xcp00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:xcp00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:xcp00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:xcp00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:xcp00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:xcp00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:xcp00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1552951..1555023)
Genome map
AA seq 690 aa AA seqDB search
MLPGFDGLRFSHWQADLREDGVLVLSLDRQGAAVNAFSQDVLLELGDVIERLALDPPKGV
VLRSAKANGFIAGADLKEFQEFDRRGTVNDAIRRGQQVFQKLAELPCPTVAAIHGFCMGG
GTEIALACRYRVASDDGSTRIGLPETKLGIFPGWGGSARLPRLIGAPAAMDLMLTGRAVS
AKAARAMGLVDKVAAPAVLVDVAAALALAGTTRPFKQRATAWATNTLLARKLLAPQMRKQ
VARKARKEHYPAPYALITTWERAGGGGIQARLAAERKAVVKLASTPAARNLIRIFFLTER
LKALGGKDTGLPAIRHVHVVGAGVMGGDIAAWAAYKGFEVTLQDREQRFIDTALARGGEL
FGKRVKDETKRPAVAARLRGDLAGSGVAQADLVIEAIIENPQAKRDLYQSIEPHLKPDAL
LTTNTSSIPLTELRGHIQRPAQFAGLHYFNPVAMMPLVEIVQHDGLDPANVARLNVFCKA
LDKFPVPVAGTPGFLVNRVLFPYLLEAATAYAEGIPGPVLDKTAVKFGMPMGPIELIDTV
GLDVAAGVGAELAPFLGLPIPAALATVEAGKRGKKDGQGLYKWENGRAVKPEVASGYEVP
ADLEDRLILPLLNEAVACLHEGVVADADLLDAGVIFGTGFAPFRGGPIQHIRSVGADALL
ARLHALQARYGERFAPRPGWESPVLREPVA
NT seq 2073 nt NT seq  +upstreamnt  +downstreamnt
atgcttccaggtttcgacgggctccgattcagccattggcaggcagacctgcgcgaggac
ggcgtgctcgtgctcagcctcgaccgccagggcgcggcggtcaacgccttctcgcaggac
gtgctgctcgaactgggcgatgtcatcgaacgcctggcactggatccgcccaagggcgtg
gtgctgcgctcggccaaggccaatggcttcatcgccggcgccgatctgaaggaattccag
gagttcgaccgccgcggcaccgtcaacgacgcaattcgccgcggccagcaggtgttccag
aaactggccgaactgccctgccccacggtggcggccatccatggcttctgcatgggcggc
ggcaccgagattgcactggcctgccgctaccgggtggcctccgacgatggcagcacgcgc
atcgggctgccggaaaccaagctcggcatctttcccggctggggcggcagcgcccgcttg
ccgcgcctgatcggggcaccggcggcaatggacctgatgctcaccgggcgcgcggtgtcg
gccaaggctgcgcgggcgatgggcctggtcgacaaggttgctgcaccggcggtgctggtg
gatgtggctgcggcgctggcattggccggcaccacgcgcccgttcaagcaacgcgccacc
gcctgggcgaccaacaccctgcttgcacgcaagctgctggcaccgcagatgcgcaagcag
gtcgcgcgcaaggcccgcaaggaacactatcccgcgccgtatgcgttgatcaccacctgg
gagcgcgccggtggcggcgggatccaggcccgcctggcggccgagcgcaaggcagtggtc
aagctggccagtacgccggcagcgcgcaatctgatccgcatcttcttcctgaccgagcgg
ctcaaggcccttggcggcaaggacaccggcttgccggccatccgccacgtgcatgtcgtc
ggtgccggcgtgatgggcggcgatatcgccgcgtgggccgcctacaagggcttcgaggtc
acgctgcaggaccgcgaacagcgcttcatcgataccgccctggcgcgcggcggcgaactg
tttggcaagcgcgtaaaggacgagaccaagcgccccgccgtggccgcacgtctgcgcggc
gatctggccggcagcggcgtggcgcaggcggatctggtgatcgaggcgatcatcgaaaac
ccgcaagccaagcgcgacctgtaccaaagcatcgagccgcacctcaagccggatgcgcta
ctcaccaccaacacctcctcgatcccgttgaccgaattgcgcgggcacatccagcgtccg
gcgcagtttgccggcctgcactacttcaacccggtggcgatgatgccgctggtggaaatc
gtgcagcacgacgggctggatccggccaacgtggcgcggctgaacgtgttctgcaaggcg
ctggacaaattcccggtaccggtcgccggcacgccaggattcctggtcaaccgcgtgctg
ttcccgtacttgctggaagcggccaccgcctacgccgagggcattcccgggccagtgctg
gacaagaccgcggtgaagttcggcatgccgatggggccgatcgaactgatcgacaccgtg
ggcctggacgtggccgccggcgtcggtgcggagctcgccccgttcctgggcctgccgatc
ccggcagcattggccacggtggaggccggcaagcgcggcaagaaggacggccagggcttg
tacaagtgggagaacggccgcgcggtcaaacccgaggttgccagcggctacgaggtgccg
gcagacctggaagatcgcctgatcctgccattgctcaacgaagcggtggcctgcctgcac
gaaggcgtggtggccgatgccgacctgctcgatgccggcgtgatcttcggcaccggcttt
gcgcctttccgcggcggcccgatccagcacatccgcagcgtcggtgcagacgcgttgctg
gcccgcctgcacgccttgcaggcgcggtatggcgagcggtttgcaccgcggccgggttgg
gagtcgccggtgttgcgggagccggtggcataa

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