KEGG T01872: XCR

Xanthomonas campestris pv. raphani: XCR_4405

Entry

XCR_4405 CDS T01872

Definition

alpha-amylase family protein

Orthology

K05343

maltose alpha-D-glucosyltransferase/ alpha-amylase [EC:5.4.99.16 3.2.1.1]

Organism

xcp Xanthomonas campestris pv. raphani

Pathway

xcp00500	Starch and sucrose metabolism
xcp01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:xcp00500]

SSDB

Motif

Pfam:

Alpha-amylase DUF3459

Other DBs

NCBI-GI:

384430018

NCBI-GeneID:

12265809

UniProt:

G0C9Z0

Position

complement(4715148..4718498)

AA seq 1116 aa
MNAVPALQADAEQSAVVADQLWYKDAIIYQVHVKSFFDSNDDGIGDFPGLISKLDYIAEL
GVDTIWLLPFYPSPRRDDGYDIAEYMAVHPDYGTIADFEQLVAQAHARGIRIVTELVINH
TSDQHPWFQRARNAPAGSPERDFYVWSDTDQEYEGTRIIFCDTEKSNWTWDPVAGQYFWH
RFYSHQPDLNFDNPAVLESVLEVMRFWLDRGVDGLRLDAVPYLIERSGTSNENLPETHAI
LRKIRATLDAEYPDRMLLAEANMWPEDTQQYFGQNADECHMAFHFPLMPRMYMAIAREDR
FPITDIMRQTPEIPETCQWAIFLRNHDELTLEMVTDSERDYLWQTYASDRRARINLGIRR
RLAPLLERDRRRIELMTSLLLTMPGTPVLYYGDEIGMGDNIHLGDRDGVRTPMQWSIDRN
GGFSRADPAALVLPPVMDPLYGFQAVNVEAQIRDQHSLLTWTRRVLSVRKRYQAFGRGTL
RFLYPGNRRMLAYLRCYQDETVLCVANLSHTLQAVELDLSEFEGRVPVDIIGGGSFPPIG
RLTYLLTVPPFGFYAFQLVSEGTLPDWHVPSPVPLPDYRTLVLRSDTEESAALLPHLATL
EGEILPAWLSARRWFSAKDQALKSVRISRRTPLPGDEPMSLLELDVELEDGHHECYMLPV
GIVWEREHPSTLAEQLALARVRQGREVGYLTDAFALKPMVRGVIDALRHDAALDFHDGDD
ASQQGQVRFESTPALAALEIPDDPEIRWLSAEQSNSSLVVADKAVFKLLRHVATGANPEI
EIGRRLTEMGYANAAPLLGSVSRVDAQGTITTIALLQGFIRNQGDAWRWTLDHLARSFDE
YATAQTDEARNEAVAGYDAFAAVVGKRLAELHEALSRSTDDADFAPQRIDLPTANDVVGG
VARQVEEMWETVHARLGATDDAAEREALESVLAERPQLDALLAKAPSVLAESLLTRVHGD
FHLGQILVAFDDVVLIDFEGEPAKPLAERRAKASPLRDVAGFLRSLDYASEVSARGEEGT
AARAGVGVDAHLDDFLVEFRRRSTQAFLDAYHAVLDASAHPWIAPAAFNAATLLFLVEKA
CYEVRYEAANRPGWLMVPIQGLRRILQRARAGAGDT

NT seq 3351 nt +upstreamnt +downstreamnt
atgaatgcagttccagcccttcaggctgacgcagaacaatcggcagtggttgccgaccag
ctttggtacaaggacgcgatcatctaccaggtgcacgtcaagtcgttcttcgactccaat
gacgatggcatcggtgatttccccggcctgatctccaagctggactacatcgccgaactg
ggcgtggacacgatctggctgctgccgttctaccccagcccgcgccgcgacgacggctac
gacatcgccgaatatatggcggtgcatccggactacggcaccatcgccgacttcgagcag
ctggtggcccaagcgcatgcgcgcggcatccgcatcgtcaccgagttggtgatcaaccac
acctccgatcagcacccctggttccagcgcgcccgcaacgcgccggctggttcgccggag
cgcgacttctatgtctggtcggacaccgaccaggaatacgaaggcacgcgcatcattttc
tgcgataccgaaaagtccaactggacctgggacccggtggccggccagtacttctggcac
cggttctattcgcaccagcccgatctcaacttcgacaacccggcggtgctggaatcggtg
ctggaagtgatgcgcttctggctggaccgcggcgtggacggcctgcgcctggatgcggtg
ccgtatttgatcgagcgctccggcacctcgaacgaaaacctgccggaaacccacgccatc
ctgcgcaagatccgcgccacgctggatgccgaatacccggaccgcatgctgctggccgag
gccaacatgtggccggaagacacccagcaatacttcggccagaacgccgacgaatgccac
atggcattccacttcccgctgatgccgcgcatgtacatggcgatcgcgcgcgaggaccgc
ttccccatcaccgacatcatgcggcagacgccggagattccggagacctgccagtgggcg
atcttcctgcgcaaccatgacgagttgacgctggaaatggtcaccgattcggagcgcgat
tacctttggcagacctacgcctcggaccgccgcgcgcgcatcaacttaggcatccgccgc
cgcctggcgccgctgctggagcgcgaccgccgccgcatcgaattgatgacctccttgctg
ctgaccatgcccggcacgccggtgctgtactacggcgatgagatcggcatgggcgacaac
atccatctgggcgaccgcgatggtgtgcgcaccccgatgcagtggtcgatcgaccgcaac
ggtggcttctcgcgtgccgaccccgccgcgctggtgctaccgccggtcatggacccgctg
tacggcttccaggcggtgaacgtggaagcgcagatccgcgaccagcattcgctgctgacc
tggacccgccgcgtgctcagcgtgcgcaagcgctaccaggcattcggccgcggcacgctg
cgctttttgtacccaggcaaccgccgcatgctggcctacctgcgctgctatcaggacgaa
accgtgctgtgcgtggccaacctctcgcacaccttgcaggcggtggagctggacctgtcc
gaattcgaaggccgcgtgccggtggacatcatcggcggtggcagcttcccgccgatcggc
cggctgacctatctgctgaccgtgccgccatttggtttctacgcgttccagctggtcagc
gaaggcacgctgccggactggcatgtacccagcccggtgccgttgccggattaccgcacg
ctggtgctgcgcagcgacaccgaagaaagtgccgcactgctgccgcatctggccacgctg
gaaggcgagatcctgccggcgtggttatcggcacggcgctggttctcggccaaggaccag
gcgctcaagagcgtgcgcatttcgcggcgcacaccgttgccgggcgatgaaccgatgagc
ctgctggagctggatgtggagctggaagacggccaccacgagtgctacatgctgccggtg
ggcattgtctgggagcgcgagcacccaagcacgctggccgagcagctggcgctggcgcgg
gtgcgccagggccgcgaggtggggtatctcaccgacgcgtttgcgctcaagccgatggtg
cgcggcgtgatcgatgcactgcgtcacgatgcggcgctggatttccacgatggcgacgat
gcctcgcaacaaggccaggtgcgtttcgagtcgaccccggcgctggccgcgctggagatt
ccggacgacccggaaatccgttggttgtcggccgaacagagcaacagctcgctcgtcgtt
gcggacaaggcggtgttcaagctgctgcgccacgtggccaccggtgccaatccggagatc
gagatcggccgccgcctcaccgagatgggctacgccaatgcggcgccgctgctgggcagc
gtgagccgggtggatgcgcagggcaccatcaccaccatcgcactgttgcagggcttcatc
cgcaaccagggcgatgcctggcgttggacgctcgatcacctggcgcgcagtttcgacgaa
tacgccaccgcgcagaccgacgaagcccgcaacgaagcggtggccggctacgacgcattt
gccgcagtggtgggcaagcgcctggccgagttgcacgaagcgctctcgcgcagcaccgac
gatgcagacttcgcaccgcaacgcatcgacctgcctaccgccaacgatgtggtgggcggc
gtggcacgccaggtcgaggagatgtgggaaacggtgcacgcccgcctgggcgccaccgac
gatgcggccgaacgcgaggcgctggaatcggtgctggccgaacgcccgcagctggatgcg
ctgctggccaaggcaccaagcgtgctggccgagtcgctgttgacccgcgtgcacggcgac
ttccacctgggtcagatcctggtggcgttcgacgacgtggtgctgatcgacttcgaaggc
gagcccgccaagccgctggccgaacgccgcgccaaggccagcccgttgcgcgatgtggcc
ggtttcctgcgctcgctcgattacgccagcgaagtgtctgcgcgtggcgaagagggcacc
gccgcacgtgccggcgtgggcgtggatgcgcacctggatgacttcctggtggaattccgc
cgccgctccacgcaagcgttcctggacgcttaccatgccgtgctcgacgccagcgcgcat
ccgtggatcgcgccggcggcgttcaatgcggccaccttgctgttcctggtggagaaggcc
tgctacgaggtgcgctacgaagcggcgaaccggccgggctggttgatggtgcccatccag
ggcttgcgacgcatcctgcaacgcgcgcgcgctggtgcgggagacacatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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