KEGG   Xanthomonas campestris pv. raphani: XCR_4482
Entry
XCR_4482          CDS       T01872                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
xcp  Xanthomonas campestris pv. raphani
Pathway
xcp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    XCR_4482 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcp03400]
    XCR_4482 (mutM)
Enzymes [BR:xcp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     XCR_4482 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     XCR_4482 (mutM)
DNA repair and recombination proteins [BR:xcp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     XCR_4482 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Zn_Tnp_IS1595
Other DBs
NCBI-ProteinID: AEL09338
UniProt: G0CAV7
Position
complement(4809395..4810276)
AA seq 293 aa
MFACLHHHVVCSGLLPCVESICMPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIA
EQIEQLLPGATITDVRRRAKYLLMDTDAGGSAVLHLGMSGSLRVLPGDTPPRAHDHVDIS
LQNGRVLRFNDPRRFGCLLWQRDGETHELLASLGPEPLSGAFTGDYLHALARGRRAAVKT
FLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSRERYRRLADAVKEILAYAIQRGGTT
LRDFISPDGAPGYFEQELMVYGREGEACRHCGGELKHATIGQRATVWCAACQR
NT seq 882 nt   +upstreamnt  +downstreamnt
gtgtttgcctgcctgcaccaccatgtggtgtgctccggtctgttgccgtgtgtcgagtcg
atctgcatgcctgagcttcccgaagtcgaaaccaccttacgtgggctggccccgcatctg
gtggggcaacgcatccatggcgtgatcctgcggcgacctgacctgcggtggccgattgca
gagcagatcgaacagttgctgccaggcgccacgattaccgatgtgcgtcggcgggcgaag
tatctgctgatggataccgatgcaggcggcagtgcagtgctgcatttggggatgtcgggc
agcctgcgggtcttgccgggcgatacgccaccacgcgcgcacgaccatgtggatatcagc
ctgcagaatgggcgcgtcctgcggttcaacgacccacgccgctttggttgcctgttatgg
cagcgcgatggcgaaacgcatgagctgctggccagccttgggccagaaccattatctggc
gcatttacgggcgattatctgcacgcattggcacgcggtcgccgtgcggcggtcaagacg
ttcttgatggaccaggcggtggtggtcggcgttggcaatatctatgcggcagagagcctg
catcgcgcaggaatcagcccgctgcgggaggctggcaaggtgtcgcgggagcgctatcgg
cggctggcggatgcggtgaaggaaatcctggcctatgcaatccagcgcggtggaaccacg
ctgcgcgatttcatcagcccggacggcgcgcccggttatttcgagcaggaactgatggtg
tatggccgcgaaggcgaagcctgcagacactgcggtggcgagttgaagcacgccacaatc
ggccaacgcgccacggtgtggtgtgcggcttgccagcgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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