KEGG   Xanthomonas citri pv. citri MN11: J163_03979
Entry
J163_03979        CDS       T03780                                 
Name
(GenBank) Superfamily II DNA and RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
xcr  Xanthomonas citri pv. citri MN11
Pathway
xcr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J163_03979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xcr03019]
    J163_03979
Enzymes [BR:xcr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     J163_03979
Messenger RNA biogenesis [BR:xcr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     J163_03979
SSDB
Motif
Pfam: RhlB DEAD Helicase_C ResIII Helicase_C_2
Other DBs
NCBI-ProteinID: AJZ01663
UniProt: A0A0U5BXX5
Position
complement(4477665..4479428)
AA seq 587 aa
MQAAPGLPRAPHEDGIMSDKPLTDVTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVAL
PGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDA
VKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICV
LDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVET
ESITAARVRQRIYFPSDEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRV
GVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHR
IGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAPRVPVEGE
EADDDAGDSVGTIFREAREQRAAEEQRRGGGRGGPGGSRSGSGGGRRDGAGADGKPRPRR
KPRVEGQAPAAAASTEHPVVAAVAAQAPSAGVADAERAPRKRRRRRNGRPVEGAEPALAS
TPVPAPAAPRKPTQVVAKPVRAAAKPSGSPSLLSRIGRRLRSLVSGN
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgcaagccgcgcccgggctgcccagggcgcctcacgaagacggaataatgagcgacaaa
ccgctgaccgatgtgaccttttcctcgttcgacctgcatccggccttgatcgccgggctg
gagagcgccgggtttacccgctgtaccccgatccaggcgctgaccttgccggtcgcgctg
ccgggcggcgatgtcgccggccaggcccagaccggtaccggcaagaccttggcatttctg
gtcgcggtgatgaatcggctgctgatccgcccggccctggccgaccgcaagccggaagac
ccgcgcgcgctgatccttgcgccgacccgcgagctggcgatccagatccacaaggatgcg
gtcaagttcggcgccgacctgggcctgcgctttgcgctggtctacggcggggtggactac
gacaagcagcgcgagctgttgcagcagggcgtggacgtgatcatcgccaccccgggccgc
ctgatcgactacgtcaagcagcacaaggtggtctcgctgcacgcctgcgagatctgcgtg
ctggacgaagccgaccgcatgttcgacctgggcttcatcaaggacatccgcttcctgctg
cggcgcatgcccgagcgcggcacccggcagacgttgttgttctcggccaccctcagccac
cgcgtgctggagctggcctacgagcacatgaacgagccggagaagctcgttgtcgaaacc
gaaagcatcaccgccgcgcgggtgcgccagcgcatctatttcccgtccgacgaagagaag
cagacgctactgttgggcttgctgtcgcgcagcgaaggcgcgcgcaccatggtgttcgtc
aacaccaaggccttcgtggagcgcgtggcgcgcaccctggagcggcatggctaccgggtg
ggtgtgctgtcgggcgatgtgccgcagaagaagcgcgagtcgctgctcaaccgcttccag
aaaggccagctcgaaatcctggtcgccaccgacgtggccgcgcgcggtctgcatatcgac
ggcgtcaagtacgtctacaactacgacctgccgttcgacgccgaagactacgtccatcgc
atcggccgcaccgcgcgtctgggcgaggaaggcgatgcgatcagcttcgcctgcgaacgc
tatgcgatgagcctgcccgacatcgaggcctacatcgagcagaagattccggtcgagccg
gtgacgtccgaactgctgacgccgctgccgcgcgcgccacgcgtgccggtggaaggcgaa
gaggccgacgacgacgctggcgacagtgtgggcacgatcttccgcgaagcgcgcgagcag
cgtgccgccgaagaacagcgtcgcggtggtgggcgcggtggccccggcgggtcgcgcagc
ggcagtggcggtggtcgccgcgatggcgcaggtgccgatggcaagccgcgtccgcgtcgc
aaaccacgggtggaaggccaagcgcctgcagctgcggcgtcgaccgaacatccggtggtt
gctgcagtagcggcacaggcaccttccgcgggcgtggccgatgccgagcgcgcaccacgc
aagcgtcggcgtcgtcgtaacggtcgtccggtcgagggtgccgagccggcactggcatcc
acgccggttcccgcgcctgccgcaccgcgcaagcccacccaggtggttgccaagccggtg
cgtgccgccgccaagccgtcgggtagcccgtcgctgctcagccggatcggccgccgactg
cgttcgctggtctccggcaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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