KEGG   Xenorhabdus doucetiae: XDD1_0305
Entry
XDD1_0305         CDS       T03784                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
xdo  Xenorhabdus doucetiae
Pathway
xdo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:xdo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    XDD1_0305 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xdo03021]
    XDD1_0305 (rpoA)
   03400 DNA repair and recombination proteins [BR:xdo03400]
    XDD1_0305 (rpoA)
Enzymes [BR:xdo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     XDD1_0305 (rpoA)
Transcription machinery [BR:xdo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     XDD1_0305 (rpoA)
DNA repair and recombination proteins [BR:xdo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      XDD1_0305 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: CDG16013
UniProt: A0A068QMF2
Position
283462..284451
AA seq 329 aa
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVQGKDEVILTLNKSGIGPVTAADIIHDGD
VEIVKPQHVICHLTDESASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccattagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcgtctatgccgggttgtgcggtgactgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggtgtacaggaagatatcctggag
attctcctcaatctgaaagggctggcggtgaaagttcagggtaaagatgaagttatcctt
actttgaataaatctggcattggccctgtgactgcagccgacatcatccatgatggtgat
gtcgaaatcgtcaagccgcagcacgtaatctgccatctgactgacgaaagcgcgtccatt
agtatgcgtattaaagttcagcgcggtcgtggatatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgccctatcggtcgtttgttagtagatgcttgctatagcccagta
gagcgtatcgcctacaatgttgaagcagctcgtgtagaacagcgtactgacctggataag
ctggttatcgagatggaaactaacggtacaatcgatcctgaagaggcgattcgccgtgca
gctaccattctggctgaacaactagaagctttcgttgacttacgtgacgtacgtcaacca
gaagttaaagaagagaagccagagtttgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaagcagaagctatccactacatcggtgat
ctggtacagcgtactgaagttgagttacttaagacacctaacttgggtaaaaaatctctt
actgagattaaagacgtactggcttcacgtggactttctctgggcatgcgtctggaaaac
tggccaccagcaagtattgctgatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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