KEGG   Xenorhabdus doucetiae: XDD1_3615
Entry
XDD1_3615         CDS       T03784                                 
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
xdo  Xenorhabdus doucetiae
Pathway
xdo00730  Thiamine metabolism
xdo01100  Metabolic pathways
xdo01240  Biosynthesis of cofactors
Module
xdo_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:xdo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    XDD1_3615 (thiC)
Enzymes [BR:xdo01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     XDD1_3615 (thiC)
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: CDG19300
UniProt: A0A068QZQ9
Position
3823562..3825538
AA seq 658 aa
MSKSNDIVISNAMIPTADISPKAHPARPRKAQRDAAQAFINTIQGVTFPNSKRIYLEGSR
QDIQVPLREIQLSPTLTGGTKEQPQFAENEPVPVYDTSGPYGDPAAVLDVTKGLHKLRQP
WIDERNDTEPVSVLSSDFTQQRLADAGLDHLRFHHRPHPLSAKPDKCVTQLHYARQGIIT
PEMEFIALRENMGRERIRSDVLRQQHAGQNFGANLPENITPEFVRQEVAAGRAIIPANIN
HPESEPMIIGRNFLVKVNANIGNSSVTSSIEEEVEKLIWSTRWGADTVMDLSTGRYIHET
REWILRNSPVPIGTVPIYQALEKVNGIAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLR
YVPMTARRLTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELCAAYDVSLSLGDGLRPG
SIQDANDEAQFAELHTLGELTQIAWEYDVQVMIEGPGHIPMQLIRRNMTEELEHCHEAPF
YTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKI
AAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPDTARAYHDEALPQESGKVAH
FCSMCGPKFCSMKITQDVRDYAAKLEQEAGMEQMSEAFRSHGSELYHSAEEVAHEKSA
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgtctaagtccaacgatatcgttatttccaatgccatgattccaacggcggatatttca
ccaaaagcgcatccagccaggccgcgcaaggcccagagagatgccgcacaagcgtttatc
aacaccatccaaggcgtcacttttcccaactcaaaacgcatttaccttgaaggttcacgt
caagatattcaggttcccctacgtgagatccaactttctcccacattaacgggcggcaca
aaagagcagccccaatttgcagaaaacgagcctgttcccgtttatgacacgtccggccct
tatggtgatccggctgccgtactggatgtcacaaaaggcttacataaacttcgccaaccg
tggattgatgagcgcaatgatactgaaccggtttccgtcctcagttccgatttcacccaa
caacgccttgccgatgccggattggatcacctgcgctttcatcatcgcccacatccattg
agcgctaaaccggacaagtgtgtgacccaattgcactatgcgcgccaggggatcatcaca
ccggaaatggaatttatcgccctgcgtgaaaatatgggacgcgagcgcattcgcagtgac
gtcttgcgccagcaacatgccgggcaaaattttggtgccaacttaccggaaaacatcacc
cccgaatttgtccgccaagaagttgccgccggtcgcgcgattattcccgccaacattaat
catcctgaatccgagccgatgattattggccgcaatttcttggtgaaagtgaatgccaat
atcggtaactcctccgtgacgtcgtccattgaagaagaggtggaaaaattaatttggtct
acccgctggggcgcagataccgtgatggatctctccaccggacgttacattcacgaaacc
cgcgaatggatactgcgcaacagcccggttcccattggcaccgtaccgatctatcaagcg
ctggaaaaagtgaacggcatcgcggaaaacctgacttgggagatgttccgcgatactttg
ctggaacaggccgagcaaggggtggattatttcacgatccatgccggcgtgctgctgcgt
tacgtgccgatgaccgccaggcgtctgaccggcattgtctcccgtggtggctcaattatg
gcgaaatggtgcctgtcccatcatcaggaaaatttcctctacacgcatttccgcgaaatc
tgtgaactttgtgccgcctatgacgtttccctctctttgggggatggattgcgtcccggc
tccattcaggatgccaatgacgaagcgcaatttgccgaactgcatacgctcggtgaactg
acccaaatcgcatgggaatacgatgtccaagtcatgatcgaagggccggggcatatcccc
atgcagcttatccgccgcaatatgaccgaagaactggaacattgccacgaagcccccttt
tataccttagggccactgacgaccgatatcgcgccgggttatgaccatttcacctccggc
atcggcgctgccatgattggctggtttggctgtgccatgctctgttatgtcaccccgaaa
gagcaccttggtttgccgaataaagaagatgtcaaacaagggctgatcacttacaaaatc
gcggcccatgcggctgatctggccaaaggccatcccggtgcacaaatccgtgacaatgcc
atgtcgaaagcacgttttgaattccgttgggaagatcaattcaatctggcgcttgatcct
gacaccgcccgcgcttatcacgatgaggccttaccgcaggaatccggcaaagtcgcccac
ttctgttccatgtgcgggccaaaattctgctcaatgaaaattacccaagatgtgcgtgac
tacgcggccaaactggagcaggaagcgggcatggaacagatgtcagaagcctttcgttcc
catggcagcgagctttatcacagtgcagaggaggtggcgcatgaaaaatcagcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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