KEGG   Xylella fastidiosa 9a5c: XF0071Help
Entry
XF0071            CDS       T00033                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
xfa  Xylella fastidiosa 9a5c
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:xfa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    XF0071
Enzymes [BR:xfa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     XF0071
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     XF0071
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
71808..72623
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRITTVCRRAKYL
LIDTNAGGSLIIHLGMSGTLRLLAPETPLRPHDHVDIMLNNRRVLRFNDPRRFGCLLWQE
DGQIHPLLQRLGCEPLSDSFNGDYLYQCSRARNVSVKTFLMDQRIVVGVGNIYAAESLFR
AGISPLCEADKISLQRYRRLAEVVKDILLYAINRGGTTLRDFLSPDGRPGYFKQELFVYG
RQQQPCKQCGSLLRQTTIRQRTTVWCGHCQG
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactcccagaagtcgaaaccacattgcgtggactgttgccctatttgaccaat
caactgatctattctcttaccctgcgtaggcgtaccttgcgctgggatatcccttcccat
atcgaaagtcgtctcccagggcatcgcatcactactgtgtgtcgtcgggccaaatacttg
ctgatcgatactaatgcagggggaagtctcatcatccaccttggcatgtccggtactctg
cgcttactggcgccagaaacgcctctacgcccacacgatcatgtggacattatgttgaat
aaccgtcgtgtgctacggttcaacgaccctcgccgcttcggatgcctgctctggcaagaa
gatggacaaattcaccctctcctacagcgcctcggctgcgaaccactctcagatagtttt
aatggtgattatctttatcagtgtagccgtgctcgcaatgtgtccgtgaaaacgtttctc
atggaccaacgcatcgtggtcggtgtcggtaatatctatgctgctgaaagtttgttccgt
gccggtatcagccctctatgcgaagctgacaaaatatctctccaacgctatcggcgcttg
gctgaagtggtcaaggatatcctcctatatgccatcaaccggggaggaactaccttgcgg
gatttcctcagtcccgatggacgccccggctacttcaagcaggaattgtttgtctacggt
cgtcagcaacagccctgtaagcagtgtggaagcctcctgcgtcaaaccaccatcagacag
cgaactactgtctggtgcggccactgccaaggttga

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