KEGG X.fastidiosa: XF0116

Xylella fastidiosa 9a5c: XF0116

Entry

XF0116 CDS X.fastidiosa

Definition succinyl-diaminopimelate desuccinylase

Orthology K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]

Pathway xfa00300 Lysine biosynthesis
xfa01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Lysine biosynthesis
[PATH:xfa00300]

SSDB

Motif Pfam: Peptidase_M20 M20_dimer Peptidase_M18
PROSITE: ARGE_DAPE_CPG2_2

Other DBs NCBI-GI: 15836721
NCBI-GeneID: 1125633
UniProt: Q9PH30

Position 111713..112846

AA seq 377 aa
MSEVFDLTCDLISRPSVTPEDAGCQAMIAARLERVGFTCEHLHYGSVANLWATHGQGAPV
LVLLGHTDVVPPGPIEAWTSDPFIPQRREGKLYGRGAADMKGSVAAFVIAAERFLVAHAG
HPGTLAILLTSDEEGQAIDGVRKVAETLRQRGQGIDWCLTGEPSSSKRLGDLLRVGRRGS
LSATLHVKGVQGHVAYPHQARNPIHLAVPALAALTARHWDDGDESFPSTSLQISNIHAGT
GANNVIPGALEVAFNLRYNPHWSAPRLESEIVALLDQHGLDYTLHWHRSGEPFYTPEGKL
RRIAREVLERFSGAPPEESTGGGTSDARFIAPLGAQCIEIGPVNASIHQVDEHVCLADLE
ALPDLYQLLIERLLADH

NT seq 1134 nt +upstreamnt +downstreamnt
atgagcgaagtgtttgacctgacctgtgatctgatctccaggccttccgtgacaccagaa
gatgccggctgccaagccatgattgcagcgcgtctagagcgtgtcggcttcacctgtgaa
cacctgcattacggttccgtcgccaacctatgggccacacatggacagggtgcgccggtg
ctagtgctactgggtcacacggatgtggtccctcccggtccaattgaagcgtggacttcg
gacccgtttatcccacagcgacgcgaaggcaagctctacggacgtggcgctgcggatatg
aaaggcagtgtggctgcattcgtgattgctgccgagcgcttcttagtcgcccatgctggg
catcccggaaccttggcgatcttactgacctctgatgaagagggccaagcaatagatggt
gtccgtaaagtggccgagacgttacgccagcgtggtcagggtattgattggtgcttgact
ggtgaaccgtcttcgagcaaacgactgggtgacctgctgcgggtcggccgtcgtggcagt
ttgtcggcaacgcttcacgtgaagggcgtccagggacatgttgcctatccccatcaagca
cgcaaccccattcacctcgccgtacctgcgctcgctgcattgacggcgcggcattgggat
gacggtgatgaatccttcccgtcaaccagcttgcagatcagcaatatccacgctggaacc
ggtgccaacaacgtgattcctggtgcactggaggttgctttcaatctgcgttacaacccg
cattggagcgccccgcgcttggagagtgagattgtcgcattactcgatcaacacgggctg
gactataccttgcactggcatcgtagcggtgagccgttctataccccggaaggaaaatta
cgtcgcatcgcacgtgaagtattagagcgtttttccggcgcacctccggaagaaagcacg
ggcggcggcacgtccgatgcgcgttttattgccccactgggcgcgcaatgtattgagatt
ggaccggtcaacgccagcattcaccaggttgatgagcatgtgtgcctggccgacttggaa
gccctgccagacctgtaccagttgctaattgagcggttgcttgctgaccattga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (16)

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