KEGG   Xylella fastidiosa 9a5c: XF_0906
Entry
XF_0906           CDS       T00033                                 
Name
(GenBank) conserved hypothetical protein
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
xfa  Xylella fastidiosa 9a5c
Brite
KEGG Orthology (KO) [BR:xfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xfa03016]
    XF_0906
Enzymes [BR:xfa01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     XF_0906
Transfer RNA biogenesis [BR:xfa03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    XF_0906
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM B12-binding
Other DBs
NCBI-ProteinID: AAF83716
UniProt: Q9PEX2
Position
complement(873404..874897)
AA seq 497 aa
MTGTSNIPTHGKEHKDAPALLPLPAPNPHHTHAAHPGNPSHDRPPSRGKLFIKTHGCQMN
EYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVFSQLGRWRALKTSGRD
VIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLHRLPDMIRARREQNRPQVDIRFPEIEK
FDHLPTPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAHLATQGVRE
INLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFTTSHPLEFS
DSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSD
FIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDHTPDEIKRTRLEHL
QKHINTYAADISKRMIGTVQTVLVEGPSKKNPNELTGKTENMRPVNFPGHPRLIGQFIDV
HITEALSNSLRGRVHTN
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgaccgggacatcaaacatccccacacacggcaaagagcacaaagacgcccccgcactg
ctgccattgcccgcaccaaacccacaccatacccacgcagcacaccccggcaacccatca
cacgaccgccccccgtcccgcggaaaactctttatcaaaacccacggctgccaaatgaac
gaatacgactcggccaagatggccgacgtactcaccacgaccgaagcactggaactaacc
gacaatcccgaagaagcagatattatcctcatcaacacctgttcaatccgcgaaaaggcc
caagaaaaagtattcagccaactcggacgctggagagcactgaaaaccagtggcagagat
gtcatcatcggcgtcgggggttgcgttgcctcccaagaaggagaggcaatcgtcaaacgc
gccccttacgttgatctggtctttggcccgcaaacattgcatcgcctcccagacatgatc
cgcgcccgacgcgaacagaaccgaccacaggtcgacatccgcttcccggaaatcgaaaaa
ttcgaccaccttcccacaccgcgtgccgaaggcccaagcgcattcgtctcgattatggaa
ggctgctccaaatattgctcattttgtgtcgttccctacacccgcggcgaagaagtcagc
cgcccatttgaagacgtgttgaccgaaatagcacacctagcgacccaaggcgtccgtgaa
atcaatctactcggccaaaacgtcaacgcctatcgcggagcgatggaccctggcccatcc
aacaacaccaaccctgcgccccccccttatgccgatctcggcctcctcatccgtgcaatc
gcccaattcgaaagcatcgggcgtatccgcttcaccacctcccaccccctggaattttcg
gattccctcgtagaagcctaccgcgacgtcccacaactggctaaccacctgcaccttccc
gttcaatccggcagcgaccgtatcctctcagcgatgaaacgtggctacaccgcactggaa
ttcaaatccaaaatccgcaaactgcgcgccgtccgcccggacatttcgatcagctccgac
ttcatcatcggcttccctggtgaaagcgacaccgacttccagaagaccatgcagctcatc
gaagacattggtttcgaccagagcttctctttcatctactcccgccgccccggcacaccg
gcctccaaccttgaggatcacacacccgatgaaatcaaacgcacccgcctagaacaccta
caaaagcacatcaacacctatgccgccgacatctcaaaacgcatgattggcaccgtgcaa
accgtgctggtggaaggaccatcaaaaaagaaccctaacgaactgaccggaaaaaccgaa
aatatgcggccagtcaacttccctggccacccacgcctcatcggacaatttattgacgta
cacatcaccgaagcactgagcaactcattacgcggccgcgtgcataccaactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (36)   

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