KEGG   Xylella fastidiosa 9a5c: XF_1502
Entry
XF_1502           CDS       T00033                                 
Name
(GenBank) RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
xfa  Xylella fastidiosa 9a5c
Pathway
xfa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:xfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    XF_1502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xfa03021]
    XF_1502
   03400 DNA repair and recombination proteins [BR:xfa03400]
    XF_1502
Enzymes [BR:xfa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     XF_1502
Transcription machinery [BR:xfa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     XF_1502
DNA repair and recombination proteins [BR:xfa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      XF_1502
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AAF84311
UniProt: Q9PD77
Position
complement(1453924..1454223)
AA seq 99 aa
MARITVEDCLEVVNNRFELVMMASKRARQLANGVPPLIENTNSEDKPTVLALREIAARKI
DSKMIDEIEKAERERTEREAMEWAAAEVVADEDMSKSDD
NT seq 300 nt   +upstreamnt  +downstreamnt
atggcacgtatcactgttgaggattgcctggaagttgttaacaaccgtttcgaactggtc
atgatggcatccaaacgtgcccgtcagctcgctaacggtgtaccgccgctcattgaaaat
accaatagcgaagataagcccaccgtactggcattacgtgaaattgctgcacgcaagatc
gatagtaagatgatcgacgagatcgagaaggcagaacgcgagcgaactgaacgtgaagct
atggagtgggccgccgctgaagtcgtcgctgacgaagatatgtctaaaagcgacgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system