KEGG T00033: XF

Xylella fastidiosa 9a5c: XF_2358

Entry

XF_2358           CDS       T00033

Name

(GenBank) RNA methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

xfa Xylella fastidiosa 9a5c

Brite

KEGG Orthology (KO) [BR:xfa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xfa03009]
    XF_2358
Enzymes [BR:xfa01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     XF_2358
Ribosome biogenesis [BR:xfa03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    XF_2358

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 MTS Methyltransf_11 PCMT Cons_hypoth95 Met_10 Methyltr_RsmB-F RrnaAD Methyltransf_15 Methyltransf_12 Methyltransf_23 UPF0020 Ubie_methyltran

Other DBs

NCBI-ProteinID:

AAF85157

UniProt:

Q9PAY7

Position

complement(2233427..2234758)

AA seq 443 aa
MARQNRFDRTSFQTQIIDLSHDGRGVARPHGEGDKVTFVTGALPGEVVIVEPVARNRHFD
EARVVEVLQASPQRVIPRCSHFGVCSGCVLQHLAEDAQVVSKQRVLLESLERIGRVSPER
VLPALAAESWGYRRKGRFSVRWVEKKGRTLVGFREHDPRFVADVSVCHTVVPQVGEKIAL
LATLLNSLDGRRDVPQIEFIAGDAVVALTVRHLQPLSEADRLALIEFGKEHGIAIFLQSG
GVESVRLLWPDEVLLAFRLKPWDVEFVFRPLDFIQINGGLNEKMIAHALDLLGAGFGERV
LDLFCGLGNFTLPLARTVDEVVGVEGDIGLVERARENARRNGLGNAEFFVADLTRDQRDA
PWMRQGFDKLLLDPPRSGAIEVLKQLPLKMFERIVYVSCHPGSLARDADFLVNEQGFVLR
AVGAMDMFPHTAHVESIAVFDRC

NT seq 1332 nt +upstreamnt +downstreamnt
gtggctcgccaaaatcgtttcgatcgtacgtcatttcaaacgcagattatcgatctcagt
catgatgggcgtggggttgcacgacctcatggtgagggagataaggtgactttcgtcact
ggtgcgcttccaggtgaggtggtgattgttgagccagttgcgcgtaatcgtcattttgat
gaggcacgtgtcgttgaggtgttgcaggcatcgccgcaacgggtgataccgcgttgctcg
cattttggtgtctgttctggttgtgtattgcagcatttggctgaagatgcgcaggttgtg
tcgaagcaacgggtgttgttggaaagtttggaacgtattggtcgtgtcagtccggagcgt
gtgttgccggcgttggccgcggagagctgggggtatcggcgtaaggggcgtttttctgta
cgttgggtggagaaaaaggggaggacgctggttggtttccgggagcatgatccgcgtttt
gttgccgatgtgtcggtctgtcatacagtggttccgcaggtcggtgaaaaaattgcgctt
ttggcaacgttgcttaacagtttggacggtaggcgtgacgtaccgcagattgagtttatt
gccggtgatgctgttgtggcgttaacggtgcgtcatttgcagccgctgagtgaggcggat
cgtttggcgctgattgagtttggcaaggagcatggtattgcaatttttttgcagtcgggt
ggggtggagagtgtgcgtttgttgtggcctgatgaggtgttgttggcatttcggttgaag
ccttgggatgtggagtttgtgttccgtccgctggatttcattcaaatcaatggggggctg
aatgagaagatgattgcgcatgctttggatctgctcggtgctggatttggggagcgtgtg
ctcgatctgttttgtggtttgggtaacttcacgttgccgttggcgcgtactgtggatgag
gtggttggagtggagggtgatattgggctggtggagcgggccagggagaatgcacggcgt
aatggtttgggtaatgctgaattttttgttgctgatttgacccgtgatcaacgcgatgcg
ccgtggatgcgtcagggctttgataagttgttgttggatccgccgcgttccggagcgatt
gaggtactcaagcagttgccgttaaagatgttcgaacgcatcgtttatgtcagttgtcat
cctggatctctggcgcgtgatgctgatttccttgtcaatgaacagggctttgtgttgcgt
gcggttggggcgatggacatgtttccgcatactgcgcacgtggagagtattgctgtattt
gatcgttgctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (15)   
   Pfam (15)   
All databases (31)   

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