KEGG   Xylella fastidiosa subsp. fastidiosa GB514: XFLM_05965Help
Entry
XFLM_05965        CDS       T01979                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
xff  Xylella fastidiosa subsp. fastidiosa GB514
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:xff00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    XFLM_05965
Enzymes [BR:xff01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     XFLM_05965
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     XFLM_05965
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1296355..1297170
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRITTVCRRAKYL
LIDTNAGGSLIIHLGMSGTLRLLAPETPLRPHDHVDIMLNNRRVLRFNDPRRFGCLLWQE
DGQIHPLLQRLGCEPLSDSFNGDYLYQCSRARNVSVKTFLMDQRIVVGVGNIYAAESLFR
AGISPLCEADKISLQRYRRLAEVVKDILLYAINRGGTTLRDFLSPDGRPGYFKQELFVYG
RQQQPCKQCGSLLRQTTIRQRTTVWCGHCQG
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactcccagaagtcgaaaccacattgcgtggactgttgccctatttgaccaat
caactgatctattctcttaccctgcgtaggcgtaccttgcgctgggatatcccttcccat
atcgaaagtcgtctcccaggccatcgcatcactactgtgtgtcgtcgggccaaatacttg
ctgatcgatactaatgcagggggaagtctcatcatccaccttggcatgtccggtactctg
cgcttactggcgccagaaacgcctctacgcccacacgatcatgtggacattatgttgaat
aaccgtcgtgtgctacggttcaatgaccctcgccgcttcggatgcttgctctggcaagaa
gatggacaaatccaccctctcctacagcgcctcggctgcgaaccactctcagatagtttt
aatggtgattatctttatcagtgcagccgtgctcgcaatgtgtccgtgaaaacgtttctc
atggaccaacgcattgtggtcggtgtcggtaatatctatgctgctgaaagtttgttccgt
gccggtatcagccctctatgcgaggctgacaaaatatccctccaacgctatcggcgcttg
gctgaagtggtcaaggatatcctcctatatgccatcaaccgtggaggaactaccttgcgg
gatttcctcagtcccgatggacgccccggctacttcaagcaggaattgtttgtctacggt
cgtcagcaacagccttgtaagcagtgtggaagcctcctgcgtcaaaccactatcagacag
cgaactactgtctggtgcggccactgccaaggttga

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