KEGG   Xylella fastidiosa Hib4: XFHB_09160
Entry
XFHB_09160        CDS       T04925                                 
Name
(GenBank) penicillin-binding protein
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
xfh  Xylella fastidiosa Hib4
Pathway
xfh00550  Peptidoglycan biosynthesis
xfh01100  Metabolic pathways
xfh01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:xfh00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    XFHB_09160
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    XFHB_09160
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:xfh01011]
    XFHB_09160
Enzymes [BR:xfh01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     XFHB_09160
Peptidoglycan biosynthesis and degradation proteins [BR:xfh01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   XFHB_09160
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: ALR06986
UniProt: A0A1L2AXG8
Position
complement(1926078..1928141)
AA seq 687 aa
MSVHHPQAKHTYAEVEQFRRRALLSLFVVVVCLFGLVAWYFKLQVLDHEIYATRSDANRI
KLHPVVPGRGMIYDRDGRLLADNVPAFRLDVMPDKVADMEVMLVELGKVIPLSEDELERF
HRERKVRRRFMPVTLKLRMSEEEMARFAVDRWRFPGVELEPYFTRRYLYSDLFAHVIGYV
GRIDEKDLETLNGGDAALTYIGKSGLERYYEQVLRGKIGYQQIETNVQGRAIRSLGRVTA
QAGADLRLSIDADLQRAMVAAFGQYEGAAVAMDPRSGEILGMVSLPSYDPNLFVNGISHA
QFNALNANPSRPQFNRLVSGGVAPGSTLKPLIALAGLDAGVRRPEDRILSTGMFYLPGVN
RGWGDSHRGGHGWTDLRKSIAQSVNTYYYKLALDLGIERFTDYMRRYGLGQLTGVDLTGE
ISGILPSLEYKRKVRKQAWYQGDTVNVSIGQGDWKVTLLQLVRSVAGLASGHMNRPHLVV
AERTAFSQPWQVLPQPPSQPISPNPGHVQVVREGMIDTMRPGGTGYQAAIGAPYSIAGKT
GTAQVASRKGEAAVDPRNLPMHLRHRALFVGFAPADNPTIAVAVAVEGGGYGASTAAPIA
RKIFDAWLLGKLPEGLEPLDSARGRTAIGLSQFDMTVAGVCEAGNRAALQLGELQVSVAG
GMLNSTAMMPVAPRAPVTLDSLPEEDP
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgagcgtgcatcatccacaagccaagcatacgtatgccgaagttgagcagtttcgccgc
cgtgctttgctgagcttgtttgttgtagtggtgtgtctgtttggtttggttgcttggtac
ttcaaattgcaggtgctcgatcatgagatctatgcgactcgttctgacgccaatcggatc
aaattgcatccagtcgtgccagggcgcggaatgatatatgaccgggacggacgccttttg
gcggataacgtgcctgcattccgattggacgtgatgccggataaggttgccgacatggaa
gtaatgcttgttgaactgggaaaggtgatcccgctttcagaggatgagctggagcgtttt
caccgtgagcgtaaggtgcgtcgaagatttatgccggtgacattgaagctgcgcatgagt
gaggaggagatggcgcgttttgcagtggatcggtggcgttttcctggtgtggagttggaa
ccctatttcactcgccgttatctttatagcgacttgtttgctcacgtgatcggctatgtt
ggtcgtatcgacgaaaaggacttggagacgctgaacggtggggatgctgcgttgacctac
atcggtaaatcgggcctggagcgctactacgagcaggtgttgcgtggcaagatcggttac
cagcaaatcgaaacaaatgtgcaaggacgtgcgattcgcagtctgggacgggtaacggca
caagcgggtgccgacttgcggttgtcgattgacgctgacttgcagcgtgcgatggtcgct
gcgtttggtcaatatgaaggtgcggcggtggcgatggatccacgcagcggggaaattctg
gggatggtgagtttacccagctacgatcccaatttatttgttaatggcatttctcatgct
caattcaatgcgcttaatgcgaatccttcgcggccgcagtttaaccgtttggtctctggc
ggtgtggctcctggttctacactcaaaccgttgattgcgttggctggattggatgccggc
gtgcgtcggcccgaggaccggattctttccaccggtatgttctacttgcccggtgtcaat
cggggttggggagattcgcatcgtggtggtcatggttggactgatttgcgtaaatcgatc
gcacagtcggttaatacttactactataaattagcgttggatctgggcattgagcgcttc
accgactacatgcgtcgctatggcctcggtcagctcaccggggtcgatttgaccggagag
atcagcggtattctcccttccctcgaatataagcgtaaggtgcgtaagcaggcttggtat
cagggagatacggtcaatgtttcgattgggcagggagactggaaagtgaccctgcttcag
ttagtacgtagcgttgctggcttggccagtggtcacatgaaccgcccgcacttggtggtg
gccgagcgtaccgccttcagccagccgtggcaggtgttgccgcaaccgccatcacagcca
attagcccgaacccggggcatgtgcaggtggtacgtgaagggatgatagacaccatgcgt
cctggagggaccggctaccaagctgcgattggtgcaccttattcgattgctggcaaaaca
ggtactgcgcaagtcgccagccgtaagggggaggctgccgttgatccgcgcaacttacca
atgcatttgcgtcatcgtgcgttattcgttggttttgctcctgctgataatccgacgatt
gcggttgcggttgcggtcgagggcggcgggtatggtgctagcactgctgcacccattgca
cgcaagatttttgatgcttggttgctaggcaagttgccagagggcttggagcctttggac
agtgcgcgaggtcgtaccgcgattggtttgagtcagtttgatatgactgttgccggggta
tgcgaagctggaaaccgtgctgccttgcaactgggagaactacaggtttcggttgctggt
ggaatgctaaattcaaccgccatgatgccggttgcgccacgtgcgccagtgactctcgac
tcattgccggaggaagacccttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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