KEGG   Xanthomonas fragariae: BER92_00010
Entry
BER92_00010       CDS       T04667                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
xfr  Xanthomonas fragariae
Pathway
xfr03030  DNA replication
xfr03430  Mismatch repair
xfr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BER92_00010
   03430 Mismatch repair
    BER92_00010
   03440 Homologous recombination
    BER92_00010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xfr03032]
    BER92_00010
   03400 DNA repair and recombination proteins [BR:xfr03400]
    BER92_00010
Enzymes [BR:xfr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BER92_00010
DNA replication proteins [BR:xfr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BER92_00010
DNA repair and recombination proteins [BR:xfr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BER92_00010
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3 DUF6212 Amino_oxidase DUF4139
Other DBs
NCBI-ProteinID: AOD13430
UniProt: A0A1Y6GR81
Position
1606..2706
AA seq 366 aa
MRFTLQREAFLKPLAQVVNVVERRQTLPVLANLLVHVKDGEVSLTGTDLEVEMISRTMVE
DAQDGETTIPARKLFDIVRALPDGSRVTILQTGDKVTVQAGRSRFTLATLPATDFPSVDE
VEATERVVVPEAGLKELIERTAFAMAQQDVRYYLNGLLFDLRDGLLRCVATDGHRLALCE
MDLEKAGGAKRQIIVPRKGVTELQRLLEGTDRDVELEVGRSHIRVKRGDVTFTSKLIDGR
FPDYETVIPIGADHEVKVDREALRSSLQRAAILSNEKYRGVRVEISPGQLKISAHNPEQE
EAQEEIEADTKVDDLAIGFNVNYLLDALSALRDEHVVIQLRDANSSALVREASSEKSRHV
VMPLRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcgttttacactgcagcgcgaagccttcctcaaaccattggcacaggtggtcaatgtg
gtcgaacgccgtcaaactctgcctgttttggccaacttgctggtacacgtcaaggacgga
gaggtctcgttgaccggcacggacctggaagtagaaatgatctcgcgcacgatggtggaa
gatgcgcaggacggcgaaactacgattccggctcgcaagttgttcgacattgtgcgggcc
cttcccgacggaagccgcgtcaccatcttgcagaccggtgacaaggtcactgtgcaggct
ggacgcagccgcttcaccctggcgacgctacctgcgacagatttcccttcagtggacgaa
gtcgaagcgaccgaacgtgtggtagtgccggaagctggtttgaaggaactgatcgagcgc
actgcgtttgcgatggcgcagcaggacgtacgctactacctcaacggcctactgttcgac
ctgcgcgacggcttgttgcgctgtgttgccactgatggccaccgtctggcgttgtgtgag
atggatctggagaaagccggcggcgccaagcgccagatcatcgtgccgcgcaagggtgtg
acagagttgcagcggctgttggagggtacagaccgcgacgtcgagctggaagtcggccgc
agccatatccgcgttaagcgtggcgatgtgaccttcacctccaaactgatcgatggccgc
ttccccgattacgaaacggtaattccgattggcgctgaccatgaggtcaaggtcgaccgc
gaagcgctgcgttcttcactgcagcgtgccgcgattctgtcaaacgaaaagtaccgtggt
gtgcgcgtggaaatttcgcccggtcagttgaagatcagcgcccataatcccgagcaagaa
gaagcgcaggaagaaatcgaggcggacaccaaagttgacgacctggcgattggcttcaac
gtcaattacttgctcgacgcattgtctgcactgcgcgatgagcacgtagtgatccagctt
cgcgatgcgaactcctctgcgctggtgcgcgaagcgagtagcgaaaagtcgcgccatgtg
gtgatgccgctacgcctgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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