KEGG   Xanthomonas fragariae: BER92_03955
Entry
BER92_03955       CDS       T04667                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
xfr  Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xfr03009]
    BER92_03955
Enzymes [BR:xfr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BER92_03955
Ribosome biogenesis [BR:xfr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BER92_03955
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AOD14033
UniProt: A0A1Y6HEY3
Position
884641..885636
AA seq 331 aa
MYDPSAESLDPSTRQAIVPDSAAGRRFDAVLAELFPEFSRSRLSEWIKSGDALLDGEMAR
PRDTLRGGESVQVQVVLETQTHAAPQDIPLNVLYEDDQVLVIDKPAGLVVHPGAGNPDGT
LVNALLFRDPALAAVPRAGVVHRLDKDTSGVMVVARTLQAQTALVEQLSARDVHRQYLAV
VVGALVSGGTANAPIDRHPRDRLKMAVRDDGRDAVTHYRLRERFRAHTALECRLETGRTH
QIRVHMAHLKSPIVGDPLYGGALKLPKGATDELVHELRTFKRQALHAETLEFLHPVSGEP
VRASAPVPADLQRLMTALREDSARAAELARR
NT seq 996 nt   +upstreamnt  +downstreamnt
atgtacgacccatctgccgaatccctcgacccgtccacccgccaggccatcgtgcccgac
agcgccgcaggacgccgtttcgacgcggtgctggccgagctgttccccgaattctcgcgc
tcgcggctgtcggagtggatcaagtccggcgatgcgctgttggatggcgaaatggcgcgt
ccgcgcgacaccttgcgcggcggcgagagcgtacaggtgcaggtggtgctggaaacccag
actcacgccgcgccgcaggacatcccgctgaacgtgttgtacgaagacgaccaagtgctg
gtgatcgacaagcccgcgggcctggtggtgcatccgggcgccggcaatccggacggcacc
ctggtcaacgccttgctgttccgcgacccggcgctggcggccgtgccgcgcgctggcgtg
gttcatcgcctggacaaggacaccagcggggtgatggtggtcgcgcgcaccctgcaggcg
cagaccgcgctggtggagcagctgtccgcacgcgacgtgcatcgccagtatctggcagtc
gtggtgggcgcgctggtgtccggtggcaccgccaatgcgccgatcgaccgccacccgcgc
gatcgcttgaagatggcagtgcgcgatgatggccgcgatgcagtcacccattaccgcctg
cgcgagcgcttccgcgcgcacactgcgctggaatgccgcctggaaactgggcgtacccat
cagatccgcgtgcatatggcgcacctgaaatcgccgattgtcggcgacccgctgtacggt
ggcgcgctcaagctgcccaagggcgccaccgacgaactggtgcacgagctgcgcaccttc
aagcgtcaggcgctgcatgccgaaacgctggagttcctgcatccggtgagcggcgagccg
gtgcgcgccagcgcgccggtgcctgccgacctgcaacggctgatgaccgcgctgcgcgag
gacagtgcgcgcgcagccgagctggcgcgccgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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