KEGG   Xylella fastidiosa Temecula1: PD0088Help
Entry
PD0088            CDS       T00113                                 

Gene name
dapE
Definition
succinyl-diaminopimelate desuccinylase
Orthology
K01439  
succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
xft  Xylella fastidiosa Temecula1
Pathway
Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:xft00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    PD0088 (dapE)
  Amino acid metabolism
   00300 Lysine biosynthesis
    PD0088 (dapE)
Enzymes [BR:xft01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     PD0088 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
110153..111286
Genome map
AA seq 377 aa AA seqDB search
MSDVLDLACDLISRPSMTPDDAGCQEMIAKRLERAGFICEHLRYAAVSNLWATHGRGAPV
LVLLGHTDVVPPGPVEAWTSDPFMPDMRNGILYGRGAADMKGSVAAFVIAAERFLAAYPQ
HPGTLAILLTSDEEGQAIDGVRKVAETLRQRGQGIDWCLTGEPSSSKRLGDLLRVGRRGS
LSATLHVKGVQGHVAYPHQARNPIHLALPAFAALTARHWDDGYESFPSTSLQISNIHAGT
GANNVIPGALEVAFNLRYNPHWIAPRLESEIVALLDQHGLDYTLHWHRSGEPFYTPEGKL
RRIAREVLERFSGAPPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDEHVCLSDLE
ALPDLYQLLIERLLAEH
NT seq 1134 nt NT seq  +upstreamnt  +downstreamnt
atgagcgatgtccttgatcttgcctgcgatctgatttccagaccctcaatgacaccggat
gatgccggttgccaggaaatgattgcaaagcgcttggagcgtgcaggcttcatctgtgaa
cacctgcgctatgctgcggtcagcaacctgtgggctacgcatggtcgaggtgcgccagtg
ctggtgttgcttggtcacactgatgtggtacctcccggtccagttgaagcatggacctcc
gacccgttcatgccagatatgcgcaacggcatcctgtacggacgcggtgctgctgacatg
aaaggaagtgtagccgcattcgtcattgccgccgagcgtttcctggctgcgtatccccag
catccaggcacattggcgatcttactgacctctgatgaagagggccaagcaatagatggt
gtccgtaaggtggccgagacgttacgccagcgtggtcagggtattgattggtgcttgact
ggtgaaccgtcttcgagcaaacgactgggtgacctgctgcgggtcggccgtcgtggcagt
ttgtcggcaacgcttcacgtgaagggcgtccagggacatgttgcctatccccatcaagca
cgcaaccccattcacctcgccttacctgcgttcgctgcattgacggcgcggcattgggat
gacggttatgaatccttcccgtcaaccagcttgcagatcagcaatatccacgctggaacc
ggcgccaacaacgtgattcctggtgcactggaggttgccttcaatctgcgttacaacccg
cattggatcgccccgcgcttggagagtgagatcgtcgcattactcgatcaacacgggctg
gactataccttgcactggcatcgtagcggtgagccgttctataccccggaaggaaaatta
cgtcgcatcgcacgtgaagtattagaacgtttttccggcgcccctccggaagaaagcacg
ggtggcggcacgtccgatgcgcgttttattgcgccactgggtgcgcaatgtattgaggtt
ggaccggtcaacgccagcattcaccaggttgatgagcatgtgtgcctgtccgacttggag
gccctgccagacctgtaccagttgctaattgagcggttgcttgctgaacattga

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