KEGG T00113: PD1543

Xylella fastidiosa Temecula1: PD1543

Entry

PD1543 CDS T00113

Gene name

rfbB

Definition

dTDP-glucose 4-6-dehydratase

Orthology

K01710

dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]

Organism

xft Xylella fastidiosa Temecula1

Pathway

xft00521	Streptomycin biosynthesis
xft00523	Polyketide sugar unit biosynthesis
xft01100	Metabolic pathways
xft01110	Biosynthesis of secondary metabolites

Class

Metabolism; Metabolism of terpenoids and polyketides; Polyketide sugar unit biosynthesis [PATH:xft00523]
Metabolism; Metabolism of terpenoids and polyketides; Biosynthesis of vancomycin group antibiotics
Metabolism; Biosynthesis of other secondary metabolites; Streptomycin biosynthesis [PATH:xft00521]

SSDB

Motif

Pfam:

Epimerase NAD_binding_4 RmlD_sub_bind Polysacc_synt_2 3Beta_HSD adh_short NAD_binding_10 KR

Other DBs

NCBI-GI:

28199422

NCBI-GeneID:

1142885

UniProt:

Q87BB5

Position

complement(1788835..1789824)

AA seq 329 aa
MVDQAWILKCSYGVPMSGNNNRVLVTGGAGFLGSHLCEKLVASGHDVLCVDNFYTGSKDS
VINLIGHPKFELIRHDVTFPLYVEVDRIYNLACPASPVHYQHDPVQTTKTSVHGAINMLG
LAKRVKARILQASTSEVYGDPEIHPQLETYWGRVNPVGIRSCYDEGKRCAETLFFDYWRQ
HKLEIKVTRIFNTYGPRMHPNDGRVVSNFIVQALRGEPITIYGDGTQTRSFCYVDDLIDG
MLRMMESPKDFNGPVNIGNPTEFTMLQLAEMVLKLVGSISKIVFQPLPLDDPKQRQPDIT
LAKSQLGWEPKVSLEDGLRETIAYFRKRV

NT seq 990 nt +upstreamnt +downstreamnt
ttggtcgatcaagcttggattttgaagtgttcttatggagtacccatgtctggaaataac
aacagagtgctagtcaccgggggtgctggctttctgggatcccatctatgcgagaaattg
gttgcttccggtcacgatgtattatgtgttgacaatttttatacgggtagcaaggacagt
gtcatcaacctgattggtcaccctaagtttgaattgatacgccatgatgtcaccttccca
ctctatgttgaagtcgaccgcatttacaatcttgcttgtccggcatcgccagtgcattac
cagcatgatccagtgcagacgacaaaaaccagtgtgcatggtgcaatcaacatgttaggg
ctggccaagcgggtcaaggcacgtattcttcaagccagcaccagtgaagtgtacggcgat
ccagaaattcatccacaactcgaaacctattgggggcgtgtgaacccggtgggcatccgt
agttgctatgacgaagggaagcgttgtgcggagacactgtttttcgattattggcgccag
cacaagttagagatcaaggtcacgcgtatttttaatacctatggtccgcgcatgcatccc
aatgatggtcgggtggtgagtaacttcattgtgcaggcactgcgtggtgagccaatcacc
atctacggggatggtacccaaacgcgcagcttctgctacgtcgatgatctgattgatggc
atgttgcgaatgatggaaagtcccaaagattttaatggaccggtaaacattggtaacccc
actgagtttacgatgctgcagctggctgaaatggtccttaaattggtgggtagtatttca
aaaatcgtatttcaaccgctgcccttggatgatccgaaacagcgtcagccggatatcact
ttggctaaatctcaacttggctgggaacccaaggtctcgcttgaagatggcctcagggaa
accattgcttatttccgtaagcgtgtttag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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