KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00136
Entry
AMD24_00136       CDS       T04108                                 
Symbol
gatA
Name
(GenBank) Glutamyl-tRNA(Gln) amidotransferase subunit A
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00970  Aminoacyl-tRNA biosynthesis
xii01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xii00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AMD24_00136 (gatA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:xii03029]
    AMD24_00136 (gatA)
Enzymes [BR:xii01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     AMD24_00136 (gatA)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     AMD24_00136 (gatA)
Mitochondrial biogenesis [BR:xii03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AMD24_00136 (gatA)
SSDB
Motif
Pfam: Amidase
Other DBs
NCBI-ProteinID: ALJ56331
UniProt: A0A0P0G3E2
Position
149186..150634
AA seq 482 aa
MEITKLTLHELQQKFRTKELHPRDAIKALEERIVQVEPKVRALLHWDVEGAMQLAERVDI
SLPLGGLPIAIKDAIHVEGDLCTCASRMLARYRAPYDATVITRLRAAGAIPFTRTNMDEF
SMGSSNETSAVQPTYNPWDLQRTPGGSSGGSAAAVAAREAFVALGSDTGGSIRQPAAFCG
CVGLKPTYGRVSRYGLVALASSLDQIGPLARSTRDCAMVFNAIAGKDPKDSTCLECAQED
FTREFNLGVKGLRLGIPKEYFVEGMDSQVRSAVEKVIQQCSELGAEIVELSLPHTQYAVN
AYYILATAEASSNLARFDGVRYGYYAEGPQSLFDHYRRSREEGFGSEVKRRIILGTYVLS
SGYYDAYYLRAQRVRTLIREDFKEAFSKVDALVCPTSPDVAFRLGERRDNPLRMYLADVF
TIATNLAGICGISVPCGFAIVEGSSLPIGVQFLGNALEEAKLLRLANAYELASGWTACTA
IL
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggaaattacaaagctaaccctgcacgagttgcaacagaagtttcgaactaaagagctc
cacccacgcgatgccattaaagcattagaggaacggattgtccaggtagagccaaaggta
agagcccttttacactgggatgtagaaggcgccatgcaattggctgagcgggtagatatt
tcgctcccactgggtgggttgcctattgctatcaaggatgccattcatgtagaaggggac
ctttgcacttgtgcctctagaatgcttgctcgctaccgtgccccctacgatgcaacggtt
atcactcggctaagagcagccggtgctattccgttcacacggacaaatatggacgaattc
tctatggggtcttctaatgaaacctcagctgtacagcctacctataatccttgggatctg
cagcgtactccgggaggctccagtgggggatctgctgcggctgttgctgctcgtgaagcc
ttcgtagccttaggctcggatacgggcggctctattcggcaaccagctgctttttgcggc
tgcgtgggtcttaaaccaacgtatggtcgcgtttcacgctatggactcgttgccctcgcc
tcgtcgctggatcagattggtccacttgctcgttctacacgcgattgtgctatggtattt
aacgctattgcaggaaaggacccaaaagattccacctgcttagaatgtgcccaggaggat
tttacgcgtgagtttaatcttggtgtgaaggggctacgtcttggtattccaaaagaatat
tttgtagaaggaatggattctcaggtgcggtctgctgtagagaaggttatccagcagtgt
agtgagctgggggctgaaattgtagaactttctctgcctcacacacaatatgctgtcaac
gcatactatattttagctacggctgaggcttcttcaaaccttgctcggtttgatggcgtg
cgctatggttactatgctgaaggtcctcaaagtttgtttgatcactatcgacgtagccgt
gaggaaggttttggcagtgaagtcaaacgtcgcattatccttggtacttatgtactaagc
tcaggttactatgatgcctactatctccgtgctcaaagagtacgtaccctcattcgtgaa
gattttaaagaagcctttagtaaagtggatgcccttgtttgtcctacatcgccggacgtt
gccttccgtctaggggagcgcagggataaccctctgcgtatgtatttggcggatgttttt
accattgctacgaatctagctggaatctgcggtattagtgtgccctgtggctttgcaata
gtggaagggtcgtctcttccaattggagttcagttccttggcaatgcccttgaagaggcg
aaactgctgcgtcttgccaatgcctacgaattagcctccggatggactgcctgcacagca
attctttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (42)   

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