KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00339
Entry
AMD24_00339       CDS       T04108                                 
Symbol
leuS
Name
(GenBank) Leucine--tRNA ligase
  KO
K01869  leucyl-tRNA synthetase [EC:6.1.1.4]
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:xii00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AMD24_00339 (leuS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:xii01007]
    AMD24_00339 (leuS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xii03016]
    AMD24_00339 (leuS)
   03029 Mitochondrial biogenesis [BR:xii03029]
    AMD24_00339 (leuS)
Enzymes [BR:xii01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.4  leucine---tRNA ligase
     AMD24_00339 (leuS)
Amino acid related enzymes [BR:xii01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   AMD24_00339 (leuS)
Transfer RNA biogenesis [BR:xii03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AMD24_00339 (leuS)
 Prokaryotic type
    AMD24_00339 (leuS)
Mitochondrial biogenesis [BR:xii03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AMD24_00339 (leuS)
SSDB
Motif
Pfam: tRNA-synt_1_2 tRNA-synt_1 tRNA-synt_1g Anticodon_1 tRNA-synt_1e tRNA-synt_1d tRNA-synt_1f tRNA-synt_1b
Other DBs
NCBI-ProteinID: ALJ56521
UniProt: A0A0P0FIV9
Position
358437..360983
AA seq 848 aa
MAYSHTKKIPFNEYESRWQLSWIRNNSFSVPNPGEAEFDPCRPKYYLLDMFPYPSGEGLH
VGHVEGYTATDILARYKRMCGFQVLHPMGWDAFGLPTEQFAIKTNQHPAVTTKKNINRFR
AQLRSLGFSYDWKREINTTSPEYFRWTQWIFLQLYNSWVNPSTGRAEAISTCRGNDPDSM
RLAYVAEVPVNWCPSLGTVLAKEEVKGGYSEVGGFPVERRPMKQWILRITAYAQRLIDDL
EGLDWPESIKLLQRNWIGRSEGVEVIFCVVSHTCSLRVFTTRPDTIFGVTYLAIAPEHPL
SSALTVSYRKSEVEAYLKLVSSKSDLERTDLNKDKTGIFTGSYAINPVNGEKIPIWISDY
VLMNYGTGAVMAVPTHDEEDFEFAKKFHLPIDSQKSVGNYFPKEGIAVHPPLIEGLPTEK
ARERITTWLEKQGIGRPAVYYKLRDWLFSRQRYWGEPFPVVWERGRHRALKPSELPIRQP
AVSDFRPSKTGDPPLAQAKEWVRYSDTAQRETNTMPQWAGSCWYYLRFCDPQNSLNFVGA
EAERYWMGSGKKAGGVDLYVGGTEHAVLHLLYARFWHKVLFDLGYVSAPEPFQRLINQGM
ILGSDGQKMSKSRGNVVNPEDIIAEYGADSLRLYEMFMGPLEQTKPWSTKGVEGVYRFLA
RVWRLAFEEDQEGSWKISSALTTEQPCTPYQLRIIHATIKKVTADIEAFSFNTAIAQLMT
FVNEFTSVNPRPVEVIQTLLQLLSPFAPHLAEEVWFRLASRFSCFTSSASTQPWPKHEES
LLAETEKELVVQINGKTKDRVHVPGSVSSTEVELVALTLPKIRAALGKKTPARFIHVPGK
LVNLVVHQ
NT seq 2547 nt   +upstreamnt  +downstreamnt
atggcttactcacacacaaaaaaaatccctttcaacgaatacgaatccagatggcaactc
tcctggatcaggaacaattccttcagtgtacccaaccctggagaagcggaatttgatcct
tgccgtcctaaatattaccttctagacatgtttccgtatccaagtggagagggactccac
gtcggccacgtcgaggggtatactgccactgacattctggctcgttataagcgcatgtgt
ggatttcaagtgctccatcccatgggttgggatgcctttggtctgccaacggagcaattt
gccataaagacaaatcagcacccagccgttaccaccaaaaaaaatatcaaccggtttcgt
gctcagctccgatcgcttggattcagctatgattggaaacgtgagataaatacgactagc
cctgaatattttcgatggacgcaatggattttcttgcaactctacaattcgtgggtcaac
ccctctactgggagggcggaagctatttctacttgccgcggaaatgatccagattctatg
agacttgcctacgtagccgaagtgccggtgaactggtgtccatctcttggtactgtactc
gctaaagaagaagtgaaaggagggtatagtgaagtaggaggattcccagtggaacgacgc
ccaatgaagcaatggatactgcgcatcacagcgtatgcacaacggctgatagatgaccta
gaaggtttagactggccagaatctatcaaactacttcaaaggaactggattggacggagc
gaaggagtagaagttattttttgtgtagtttcccatacttgttctcttagggtttttact
actcgcccagacactatctttggggttacttatttggctattgctccggaacatccacta
tccagcgctttgacagtttcctaccgaaaatccgaagtagaggcatatttaaaactggtt
tcttccaaatccgacttggaacgcactgatttgaataaggataaaacaggcatctttact
ggatcctatgctattaatcccgtcaatggagaaaaaatcccgatctggatctccgattat
gttctcatgaattatggtactggcgctgttatggctgtaccaacgcatgatgaagaggac
tttgagttcgctaagaaattccacctgcctattgactctcagaaatctgtagggaattac
ttccccaaagagggtattgcggtccaccctccccttattgaggggttgccgaccgaaaaa
gctagggaacgtattaccacatggcttgaaaaacaggggataggcagaccggcagtttat
tataagcttcgcgactggctattctcacggcagcgctactggggtgaaccatttccagtt
gtttgggagaggggacgacatcgtgctcttaagccctcagagttacctattcgtcagcca
gctgtatctgactttaggccctccaagacaggagatccaccccttgcacaggcaaaggaa
tgggtacgctattcggatacagcccagagagaaactaacacaatgccccagtgggcaggt
tcatgttggtattatctacgcttctgtgacccacagaattccctaaatttcgttggagca
gaagcagaaaggtattggatgggaagcggaaagaaagccggcggcgttgacctttatgtg
ggaggcactgaacacgctgttttgcaccttctctacgcccggttttggcataaggtccta
tttgatctaggatatgtttccgcgccggaaccttttcaacgactgatcaaccaagggatg
atacttggctcagatgggcaaaaaatgtccaagagccggggcaatgttgtcaacccagag
gatatcatagcagaatatggggcagattctctacgcctatacgaaatgttcatggggccc
ctagaacagacaaaaccctggagcacaaagggtgtagagggtgtttaccgcttcctagca
cgagtttggcgccttgcatttgaagaagaccaagaaggcagctggaaaatttcctctgca
ctgactacagaacagccctgtaccccctaccagttacgaataattcacgctaccatcaag
aaggttacagctgacatcgaagctttttccttcaacacggccatcgctcagctaatgact
tttgttaatgagttcacatctgttaatcctcgtcccgtagaggtcattcaaactttactc
caactccttagtccgtttgccccccatcttgctgaggaagtttggttccgacttgcctca
cgattctcgtgctttacttctagtgcttctacccaaccttggcctaagcacgaagaatct
ctgcttgcagaaactgaaaaagaactagttgtgcaaattaatggaaaaactaaagaccgt
gtgcatgtcccaggttctgtctcctccacggaggttgaattggtcgcacttactctacca
aaaatccgcgcagcacttggcaaaaaaacacctgcccgctttattcatgtacctggaaaa
ttggtcaaccttgtcgtccaccaataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (58)   

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