KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00349
Entry
AMD24_00349       CDS       T04108                                 
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00300  Lysine biosynthesis
xii00550  Peptidoglycan biosynthesis
xii01100  Metabolic pathways
xii01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:xii00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AMD24_00349 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AMD24_00349 (murF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    AMD24_00349 (murF)
Enzymes [BR:xii01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     AMD24_00349 (murF)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: ALJ56530
UniProt: A0A0N7IE65
Position
371011..372372
AA seq 453 aa
MDICTIREVAEMCGGVLLQGNPQCLVSRLSRDTRTLQPGDVYIALRGVRFDGNQFLAQAE
AHGASAAIVESLSTLPTNSQLAVILVPNSLVALQHLAESWRGKITPKVVCITGSNGKTTT
KELTARVLARRYSVSYTQGNFNNHIGLPLTILATSSAHNVAVWEIGMNHRGEILPLAKLA
RPQIGIITNIGVAHIANMGSREAIAAEKGNLIRQIAPDGTLVLPAEDDFSKSLAFSSLIR
TLFVGLGSGAVTASNIEVLSNGTRFIAHGFGQRAPVTLSIPGRHIVKDALFALAVGLELG
ISIPEGATELSHTPLLHCHPQLKAKRKVQFLDDSYNANPDSVMTALNTLSEIPCKGHRLA
ILGKMDELGAYAKRGYQKVAQAAAVSLVDTLVAVGEETFPLIEEATKRGMRNVYHIPDTP
AAAQLLNSITNPGDLVLIKGSNSARMSRVIEQY
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggatatctgtaccatcagagaagttgcagagatgtgcgggggtgtacttttgcagggg
aaccctcagtgtctcgtcagccgactttctcgagatactcgcacactgcaaccgggcgat
gtctacattgcattgcgtggtgttcgctttgacggaaaccagtttctggctcaagcggaa
gcacacggcgctagtgctgcaattgtggagtccctttccacactacctaccaactcccag
ttagctgttattctagttccgaactcactagtagcgctacagcatctcgccgaaagttgg
cgaggcaagatcacgccaaaagtggtttgtatcaccgggagtaatggtaaaacgactacc
aaggaacttactgctagagttctagcaagacgatattctgtttcttacacacaaggcaac
tttaacaaccacatcggactaccacttactattcttgctacatcttctgctcacaatgta
gcagtttgggaaattggtatgaatcaccgcggagaaatccttcctttagccaaactagct
cgccctcagatcggcattatcaccaatatcggagttgcccacattgcaaacatgggttca
cgcgaagcaattgcagcagagaaagggaacctgattcgccagattgcgccggatggcaca
ctggttcttcccgcagaagacgatttttctaaaagtctggccttttcctcactgatccgt
actctctttgtcggattaggctctggtgcagttactgcttcaaatattgaggtcctttcc
aatggaactcgttttatcgcacacggttttgggcaacgcgctcctgtgacgttaagtatt
cctggaaggcacatagtaaaagacgctttatttgccctagcagttggccttgaattggga
atttctattcctgagggggcaacagagctaagtcatactcctctattgcactgccatccg
caactgaaggccaagcgtaaggttcaattcctagacgatagctataacgccaacccagat
tcggtgatgaccgctcttaacactctctctgaaattccatgtaagggacaccgtcttgcc
atccttggaaaaatggatgaattaggagcctatgcaaaaaggggatatcagaaggtagcc
caagcggcagcagtctcccttgtagataccctagtagcagttggagaagaaactttccca
cttatcgaggaggcgacaaaaagagggatgcgaaacgtctatcatattccggatactcct
gccgcagcacagcttctcaacagcataacaaatcctggagacttggtcctgatcaagggc
agtaattcagcacgcatgagtcgcgtcattgagcaatattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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