KEGG   Xenopus laevis (African clawed frog): 100036929
Entry
100036929         CDS       T01010                                 
Symbol
trim55.L, murf-2, rnf29, trim55
Name
(RefSeq) uncharacterized protein LOC100036929
  KO
K10654  tripartite motif-containing protein 55
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100036929 (trim55.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    100036929 (trim55.L)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100036929 (trim55.L)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-B_box zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 zf-RING_6 Sina_RING YjdM_Zn_Ribbon zf-RING_11
Other DBs
NCBI-GeneID: 100036929
NCBI-ProteinID: NP_001091169
Xenbase: XB-GENE-6087251
UniProt: A1L2R6 A0A974CQ19
Position
6L:126936003..126997382
AA seq 498 aa
MSTSLQYKSFSKEQQTMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCASDIFQASNT
YLPTRGGNTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDLYKQESTRPERKTD
QPMCDEHEDEKINIYCLNCEVPTCSMCKVFGAHKNCEVAPLTQVFQRQKSELSDGIAILV
GCNDRIQAVVSQLEETCKTVEENSKRQKEQLCEQFDYLYAILEQRKGELSQAITRDQEER
LEYVRSLMKKYGSHTETVSKLVESGIQFMDEPELAVFLQNSKTLLQKMTEASSGFQMEKV
EAGYENMDHFTVDLNREERIIREIDFYREEEEEEEEEEAAADDEDSEGVHTESSGEEDVA
ETFAQTSQLETTELDNTAEALPPPPELEVSTPSAAVPQGEVEPSDIQQASESNTQVPSAT
ETTDPLLYPSWYKGQAQQESSTNKVELGDALGPVDQSVPKEITVKNDLSSVTLKESSAEA
GKDTSSSAAIPQLQENVL
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgagcacctcattgcagtacaagtcattctccaaagagcagcaaactatggataatcta
gagaagcaactcatatgtccaatatgcctagaaatgttttccaagcctgtggtcatactc
ccctgccagcataatctgtgtaggaagtgtgcgagtgatatattccaggcttccaatacg
tatttgccaacgcgaggaggaaacacagtagcatcgggtggacgttttcgctgcccttcg
tgtagacatgaagtggtgttggacagacatggcgtatatggactacaaaggaacttactg
gttgaaaatattattgacctttataaacaggaatctacaaggcctgaaaggaagactgac
caaccaatgtgtgatgagcatgaagatgagaaaatcaatatttattgtctgaactgtgaa
gttcctacctgctccatgtgcaaagtgtttggagctcacaaaaattgtgaggttgctcct
cttacacaagttttccaaagacaaaagtctgaactctcagatggcattgcaatactggtt
ggatgtaatgacagaattcaggcagtagtaagccaactggaggagacttgcaaaaccgtt
gaggaaaatagtaaaaggcaaaaagaacaactatgtgaacaatttgattatctgtatgct
attttggaacaaagaaagggggaactgagccaagcaatcaccagagaccaagaagaaagg
cttgaatatgtccgatcattaatgaaaaaatatggcagccacacggagactgtttcaaag
cttgttgaatcaggaattcagtttatggatgagccagaattagcagtattcctacagaat
tctaaaaccttgctacagaaaatgacagaggcatcaagtggatttcaaatggaaaaagtt
gaagctggatacgaaaatatggatcatttcacagtggatctaaacagagaagaaagaata
atacgagaaatcgacttttatagagaagaggaggaagaagaggaggaagaagaagcagca
gcagatgatgaagattctgaaggggttcacacagagtcttcaggggaagaagatgtagca
gaaacatttgcacagacatcccagcttgaaaccactgaactcgataacacagctgaggcg
ctacctccacctccagaacttgaagtcagtactccatctgctgctgtccctcagggcgag
gttgagccaagtgatattcaacaggcctctgagtctaacactcaagtgccgtcagcaaca
gaaaccactgatcccttgctttatcctagttggtataagggccaagcacaacaagaatcc
agcacaaacaaagtcgagttgggtgatgctctgggtcctgtagatcagtcagttcctaag
gaaataaccgtaaagaatgatctttcgtcagtaacccttaaagaaagttcagcagaggct
ggaaaggacaccagctcatctgcagcaattccacagttgcaagagaatgtgttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (40)   

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