KEGG   Xenopus laevis (African clawed frog): 100037169
Entry
100037169         CDS       T01010                                 
Symbol
prpf4b.L, pr4h, prp4, prp4h, prp4k, prpf4b-a, prpf4b-b
Name
(RefSeq) pre-mRNA processing factor 4B L homeolog
  KO
K08827  serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:xla01001]
    100037169 (prpf4b.L)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    100037169 (prpf4b.L)
Enzymes [BR:xla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     100037169 (prpf4b.L)
Protein kinases [BR:xla01001]
 Serine/threonine kinases: CMGC group
  DYRK family [OT]
   100037169 (prpf4b.L)
Spliceosome [BR:xla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    100037169 (prpf4b.L)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr THRAP3_BCLAF1 Pox_ser-thr_kin ABC1 Rib_recp_KP_reg CoV_S1_C
Other DBs
NCBI-GeneID: 100037169
NCBI-ProteinID: NP_001091334
Xenbase: XB-GENE-6255248
UniProt: A2VD02
Position
6L:complement(92121980..92148909)
AA seq 959 aa
MAAVDSELRDAEVEDADTSDKSGVEENGEVSEEEQPQNKHSKHKKKKHKHRSKHKKHKHS
SEEEKDKKHKHKHKHKKHKRKDSGNIEKGDVSPSKRAKLDDFALLEDLEKQRAMIKAELD
NELMEGKVQSGMGLILQGYNSGSEEEGEINEKARNGKKTSSKSNAKGKHDLDSKPASSKA
KEKAKHKSEKKKTKTNSEVVKEKIPNSKSKERRKSKSPAKRSKSEDQPRRSPALHRQSPE
KNIKTKSPQEERVKSRDRKKSPVASESKSRERTKKSKSPVSRRSKSKERRSKSKERKPRK
SESDRDKKPLKSPSKDASSGKENRSPGRRTARSPKARSLSPKLRDRAVRHSRSPPVHDRK
SKQSPPRIQSPTRRAKSKSVERKRREPERRRLSSPRSRIREDIAARHDRIKEASPPRWSP
SRRRPSRSPVRRRSRSPLRRSRSPRRRSRSPHRRERGRRSRSRLRRRSHSRSGRFRRRRS
RSKDKEDKFKGSLSEGMKIEQESSDDNLEDFDVEEEDEEAVIEQRRLQRLAIVQKYSYLY
EDSNMSMPSEPSSPQSSTRSRSPSPDDILERVAADVKEYERENIDTFEASVKAKYNLMTE
QNNGAIQKKVLAPDMFTESDDMFAAYFDSARFRAAGIGKDFKENPNLRDNWTDSEGYYRV
NIGEILEKRYNVYGYTGQGVFSNVVRARDMARANQEVAVKIIRNNELMQKTGLKELEFLK
KLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQ
QLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRA
PEIIIGKMYDYGIDMWSVGCTLYELYNGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGV
CKDQHFDANLNFMYIEVDKVTEREKVTVMSTINPTKDLSADLVGCQRLPEDQRKKSTST
NT seq 2880 nt   +upstreamnt  +downstreamnt
atggctgctgtggattcggagctacgggacgcagaagtggaagatgctgatacatcagat
aagagtggagtagaggaaaatggagaagtctcagaagaagaacagccccaaaacaagcac
agcaaacacaagaaaaagaaacacaagcatcggagcaagcacaagaaacataaacattct
tctgaggaggagaaagataaaaaacacaaacataagcataaacacaaaaaacacaaaaga
aaagattctggaaatattgagaaaggggatgtttccccttcaaagagggcaaaactggat
gactttgctttgctggaagacttagaaaaacagcgtgctatgataaaagctgaacttgac
aatgaattaatggagggaaaagttcagtctggcatgggtttaatattgcagggttataac
tctggatctgaagaggaaggtgagattaacgaaaaagcccgtaatggtaaaaaaacttct
tccaagtcaaatgccaagggaaaacatgatcttgattccaaacctgcctccagtaaagcc
aaagagaaggcaaaacataaatcagaaaagaaaaaaaccaaaaccaattctgaagttgtt
aaagaaaaaataccaaacagcaaatcaaaggagagaagaaaatctaaaagtccagcaaaa
agaagtaaatcagaagatcagccaagaaggtcacctgcccttcaccggcagtcaccagaa
aaaaatataaaaacaaaatcacctcaagaagaaagggtgaagtcaagagatagaaagaaa
tcaccagtggctagtgagagtaaaagcagagagagaacgaaaaaatcaaaatcccctgtt
tctagaaggagcaaatcaaaagagagacgttcaaaatcaaaagagaggaaacccaggaag
tctgagtcagacagagataaaaagcctcttaaatctccatcaaaagatgcttcttctgga
aaagaaaaccgatcacctgggcgtagaacagcacggagtcctaaggccagaagcctgtct
cctaaactgcgtgatagggctgtaagacacagcagatctccacctgttcatgatcgcaaa
agtaaacagtctccaccaagaatacagtcccccacaaggagagctaagagcaaatctgtt
gaaagaaaaagacgagaaccagaaagaaggaggctatcttctcccagatcaagaattagg
gaggatatcgcagcaagacatgatcgaataaaagaagccagtcctcctagatggtctcct
tctcgtagacgaccaagcaggtctccagtgcgaaggcgatcacgctcccctctgaggagg
agcagatcccctaggagaagaagcagatcgccccatagacgagaaagaggtagaagaagt
agatctcgtttaaggcggaggtcacattcccgaagtggacgttttcgtagaagaagaagc
agaagcaaagataaagaggacaagtttaaaggaagcctttctgaggggatgaaaattgag
caagaatcttctgatgataacctggaagattttgacgtggaagaagaagatgaggaagct
gtaatagaacagaggcgactacagagactagcaattgtacaaaaatatagttacttatat
gaagacagcaatatgtctatgccgtcggagcctagcagtcctcagagcagtacacgaagt
cgttcaccttctccagacgatatccttgaacgggttgctgccgatgttaaagaatatgag
agagagaacattgacacgtttgaagcctctgtgaaagccaaatataatctcatgactgaa
cagaataatggtgcgattcagaagaaggtattagcaccagacatgttcacagaatctgat
gacatgtttgctgcatattttgacagtgctcgttttagggctgctggaattggaaaagat
ttcaaggaaaatcctaatctgagggataactggacagattcagaaggctattaccgtgta
aacattggtgaaatactggaaaaacgttataatgtatatggatacactggtcagggtgta
ttcagtaatgttgtacgtgctcgggatatggcaagagcaaatcaagaggttgctgtcaaa
attatcagaaacaacgaacttatgcaaaaaactggtttgaaagaacttgagttccttaag
aagttgaatgatgctgacccagatgacaagttccattgtttacgattattcaggcacttt
tatcacaagcaacatttgtgtctagtgtttgagccactcagcatgaatttgagggaggtt
ctgaaaaaatatggaaaagatgttggactgcatattaaagctgtgagatcctacagccag
cagctctttctggcattaaaacttttaaaaagatgcaatatccttcatgctgatattaag
cctgataatattttggtaaacgaatccaaaactatactgaaactttgtgattttggatca
gcatctcatgttgcagataatgatattacgccctaccttgtcagccgattttacagagca
cctgaaattataattggaaaaatgtacgactatggaatagatatgtggtcagtgggttgc
accttatatgaactctataatggaaagattttattccctggcaaaactaacaatcacatg
ctaaaattagctatggatttgaaaggaaaaatgccaaacaagatgattcggaaaggtgtt
tgtaaggaccagcactttgatgcaaatctcaactttatgtacattgaagtcgataaagta
acagaaagggagaaagttaccgtcatgagcactattaacccaacaaaggacctatcggca
gacttagtaggctgtcaacgacttccagaagatcaacgtaaaaaaagtacatcaacttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (122)   
   KEGG ORTHOLOGY (1)   
   RefGene (117)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (12)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (152)   

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