KEGG   Xenopus laevis (African clawed frog): 100127327
Entry
100127327         CDS       T01010                                 
Symbol
ranbp2.L
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 3 isoform X2
  KO
K12172  E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03013  Nucleocytoplasmic transport
xla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100127327 (ranbp2.L)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100127327 (ranbp2.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    100127327 (ranbp2.L)
   03110 Chaperones and folding catalysts [BR:xla03110]
    100127327 (ranbp2.L)
   04121 Ubiquitin system [BR:xla04121]
    100127327 (ranbp2.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100127327 (ranbp2.L)
Chaperones and folding catalysts [BR:xla03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    100127327 (ranbp2.L)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100127327 (ranbp2.L)
SSDB
Motif
Pfam: Ran_BP1 IR1-M zf-RanBP VID27_PH TPR_16 TPR_1 TPR_2 TPR_14 TPR_8 TPR_7
Other DBs
NCBI-GeneID: 100127327
NCBI-ProteinID: XP_018102541
Xenbase: XB-GENE-6252429
UniProt: A0A1L8HGL2 A0A974DNL8
Structure
Position
2L:complement(113558720..113611204)
AA seq 2905 aa
MRRSKAEIQRYVENAQNSASSPREKSMKGFLFARLYYEAKEYELAKRSVSSYISVQERDP
KAHRFLGQLFEIEGNVEKAVGCYKRSLELNPTQKDLTLRIAELICTLNIKDGRAEYWVER
ASKLFPGSPEIYRLKEQLLSSQGEAGWNQLFDLIQAELFARPNDVYVNLKLVDLFLSNQR
LEEAVLHCLKPERRALRTDIEWCSCVVRVFKEYLASKQGQKNTNMRMITKELLLAQCDVV
FLTLSKKDVQKSKEALERFDQALLSVKQSVSGTDASDLSVTFYEMRGHYYMHAGTLLLKM
AQSCEVQWKALIEPAALCYLLAYQVPKPKSKPVKGDDNGQGFLEELAFDRQSKSGHLLLT
LSHGKQNFISEIIETFANQCGQSILLKFLFEDNLSMQDSFMGSDDISYVENRVPDLSELS
QHDNGSLRIHNGDLQHLTWLGLQWHFLSTLPPLRKWLKQIFPRVPQETSRLESNIPESIC
LLDLEVFLLAVVQTSYLQLQDNNTTADPNRPRCLPLPICKQLFTDRQRSWWDAVYSLITK
KALPGTSAKLRSVIQHDLTTLRAQEKHGLQPAVLVNWARGLHKTGYSLNSFYDQKEYMGR
CVHYWKKLLPLLDLVKQKKSIPEPVDPLFKHFHNKDIKVSEVKDLEDEACIAFATLDLVD
GKTEDAIIAFESVKNVVAYWNLALIYQRKAEEIENDCLPAEEQEEFQECLLKCKGFLKMI
CDEYSAYPSIATSLPVPVETVFEMLDSVKQSLGEAMDDHSPAFMENHSVLTTSAIKHSTP
SPTKLTISPSKSARFSPKTPPRWAEDQKSLLEVLCNKVEALKKEVQELKHNNSNANVSPH
RWPNEGFESDTVADSYQGTQNFYTVPLTVSTSGPAAYYGQSPAYNSQHLLRPAANITPTK
TSVYAMNRLPPQQHMYTYPQQMHTPPTQQSSAGCVFPQEIYGPPLRFESPAAAILSPHNE
EFYNYNVPPASTNPPLPEPGYFTKPSTAMQHSKQEVPKVSDFGKGCLGQSTSEGQKPSPF
TVPMQSTPASSTFKFNSNFKSNDGDFTFSSSHAGASSAYTGSESLLGLLTSDRPTQEQGK
KSDFENIASDEKNMFRFGEKSFSPGFTVTGTQSQDKNPLVFGQSENIFTFKTPGKSTFKP
PTFGTQTKDAHNHSVESDAGSEHVADDDGPHFEPIIPLPEKVEVKTGEEDEEEMFCNRAK
LFRFDAETKEWKERGIGNVKILRHRLSGKIRLLMRREQVLKICANHYINADMKLKPNATS
DKSYVWHAYDYADEMPKPEQLAIRFKTVDEAAHFKAKFEEAQRLLAMAEAPAISAQHKNA
KDNLKLDASKVKEAPLPFGSQFILKRGEWQCDCCLATNAPTSTSCVCCQTPNKNKSSSIS
SVCISAPSFTFVKESATNKLAFGQQLLKDKDQWTCSKCSQKNDAGVSHCSSCQTQSQAKA
GISQPNIASSGFTNNTSAQGDNLAAVFGKKAGQWDCDVCYVRNEPSANKCISCQNTKPLS
KVSGTQAASFSFAAGADNSQKNFGAQFAKKEGQWDCDACYVRNEPLATKCISCQNTKLLS
KTTGTQAASFSFAAAADNSQKNFGGQFAKKEGQWDCSSCLVRNEASAPNCVACHSANPQI
TNKDVVPPALTPSGFKFGHNAEVGKTQQSLSAMFSCKQGQWECSTCLVINDAAKDTCAAC
QAAKPGSSASQSKEVPSTFGIKANSSQNFGQPAAGFNCGFSAKGFKFGISDEKASASNFT
FKAPATNEETKMVKDGFNFPVSAGSLSFKFGISEPDKTKEMSTGFMKGTSTNNKGSETAE
TTAQAEKIQQSPDKVLGQSVQSFSFADIAKSTEGIEFGKADPNFKGFSGAGQKLFTSSNQ
VNASNAQEAADDLYKTEERDDIHFEPIVQLPDKVDLITGEEDEKTLYSQRVKLYRFDATS
GQWKERGVGNLKILKNEVNGKLRVLMRREQVLKVCANHWITTTMNLKPLTGSDRAWMWLA
NDFSEGDAKLEQLAVKFKTPEQAEEFKIKFDQCQCLLLDIPLQTPHKLVDTGRTAHLIQK
AEEMKTGLKDLKTFLTDKAKPLDDSNAINTTDLEKQALADGTEPTYEWDTYDMRGDAHEE
TLDDSVYASPLASSPEKKNLFRFGDLSTSGFNFSFQPEPSPSKSPTKLNHSRVSVGTDEE
SDVTQEEERDGQYFEPVVPLPDLVEVTSGEENEQAIFCHRAKLYRFDKDSNQWKERGIGD
LKILQRLDNKSARVVMRRDQVLKLCANHRITTDINLQPMKGAERAWVWTAHDFSEGEGKV
ECFAVRFKLQEAADLFKEVFEEAKEAQAKDCLLTPVSSRGTTPRAASCGKAAIAILEETT
KERTDQQPEEDTSLTEASTPSPTDQPAKALVSPANFTFGSDVVKNIFGSEKQVPFAFGNT
SSTGSLFGFSFNASQSQGQQVQKQPPKVTLDFNATFKDAETTNALQKPSQSSGQSPIVSS
LSSSSSSSSSTLMQPMPARDKAADVPDADSSSDVLIVYVATPTPEQKALAETLLLPLTFF
CYKNKPGYVSDESDIDDEDFETAVKNLNGILYTEDKKDKASSRLSGCSKEPTAESDQDCI
IVWEKKPTPEEKAKADSLKLPPTFFCGLGSDTDEDKDNLEDFDTEVRKVKEAKGVPEADV
TSSPEAAIVSAAETSVSLPPKQEPDSTTSISQEPVDLSSKQELPKTDSKGFSTPSFSFGL
GEVSGVSFADLASTNSGDFAFGSKDTNFQWANTGAAVFGTLSQNKKGEDADGSDEEVVHS
DDVHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRAVGQWKERGVGDIKILFHKEKG
YYRVLMRRDQVLKVCANHVISTEIKISTLSTSNNSLVWTATDYSDGEGKVEQLAVRFKTK
ELTDSFQNKFEECQHNLQEESNPQH
NT seq 8718 nt   +upstreamnt  +downstreamnt
atgaggcgcagtaaagcggaaatccagagatacgtagaaaatgcgcagaacagcgcgtca
tcacccagagagaaatccatgaaaggattcctttttgctagactctactatgaggctaaa
gaatatgaacttgctaaaagatctgtatcttcgtacataagtgtacaggaaagggaccca
aaagcacacaggttccttggacaactgtttgagatcgaagggaatgtggaaaaagctgtt
ggctgctacaagcgttcattggagttaaaccccactcaaaaggatcttactcttcgaatt
gctgagttgatatgtactctaaatatcaaagatggcagagcagagtactgggtggagaga
gcatccaaactcttcccaggaagtcctgaaatttacagactcaaagaacaactgctttcc
tcacaaggtgaagctgggtggaatcagctctttgatttaatacaggctgaactttttgca
agacccaatgacgtgtatgtaaatctcaagcttgtagatttgtttctgtccaaccaacga
ctggaggaagcagttttgcattgccttaagcctgagagaagagctttgaggactgatata
gaatggtgctcctgtgttgtccgagtatttaaggaatatctggcttcaaagcaaggacaa
aaaaataccaatatgaggatgataacaaaggaactgttgcttgcacaatgtgatgttgtc
tttttgacactttctaaaaaagatgttcagaagagcaaggaagcccttgaaagatttgac
caggccctcttgtcggtaaaacagtctgtgagtggtacagatgcttctgatctgtctgta
acgttttatgaaatgagaggtcactactacatgcatgctgggactctgctactgaaaatg
gctcagagctgtgaagttcaatggaaggctttaattgaacctgctgcactctgttatctt
ctggcttatcaggttccaaagccaaaaagtaagccagtaaagggggatgacaacggacaa
ggttttctagaagaattagcgtttgaccggcaaagtaaatctggtcacttattgctaact
ttgagccatggaaaacagaacttcattagtgagattatagaaacgtttgcaaaccaatgt
gggcagtctattttgctgaagtttctgtttgaggacaatttatcaatgcaagattctttc
atgggtagtgatgatataagctatgtcgagaatcgggtgccagacttaagtgagctttcc
cagcatgacaatggttctcttcgaatacacaatggggaccttcagcacctgacctggctt
gggttacagtggcactttctatcaactttacctccccttcgcaagtggcttaaacagatt
tttcctcgggtgcctcaggaaacttcaagacttgagtccaatattccagagtctatctgt
cttctggatcttgaagtatttttgctggcagttgtgcaaactagttaccttcagttgcaa
gataacaacacaacagctgatccaaacagacctcgatgtcttcctcttccaatctgcaaa
cagctctttacagataggcagcggtcctggtgggatgctgtttacagtcttattacaaaa
aaagctttacctggcacctcggcaaagctgcgttctgtgattcagcatgatcttactact
ctaagagctcaggagaagcatggcctgcaacctgctgttcttgttaattgggcaaggggt
cttcacaaaacgggttacagtctgaattccttctacgaccagaaggagtacatgggacgc
tgtgtccactactggaagaagctgttaccacttctagatttggtcaaacagaaaaagagc
attcctgagcctgttgatcctttgtttaagcactttcataataaagatattaaggtttct
gaagtaaaagacttggaagacgaagcatgcattgcttttgcaacattggatttagttgat
ggaaaaacagaggatgcaataattgcctttgagtctgttaagaacgtcgttgcctattgg
aaccttgctttgatataccagcgtaaggcagaagaaattgagaacgattgtttgccagca
gaagaacaggaagagttccaggaatgcctgcttaagtgcaaaggctttttgaaaatgatt
tgtgatgaatattcggcttatccctccattgcaacatcgttgcctgttcctgttgagact
gtgtttgagatgctggattcagtgaagcagagtcttggagaagcgatggatgatcatagc
ccagcattcatggaaaatcattcagttttgacaacttcagcaataaaacattccacgcca
tcacccaccaaactgaccatatcgccaagcaaatcagctcggttttctcccaaaacacca
ccacgttgggcagaggatcaaaagtccctgcttgaagtgctctgtaataaagtggaagca
ttgaagaaagaagttcaggagctaaaacacaacaattcaaatgcaaacgtgtcccctcat
agatggcctaatgaagggtttgagtctgatactgttgctgatagctaccaaggaactcaa
aatttctatacagttcccctaacagtttccacttcaggacctgctgcttactatggtcag
tcaccagcatataattctcagcatcttctcaggccagcagctaatattactccaacaaag
acatctgtgtatgcaatgaacaggctgcccccacaacaacatatgtatacctatccacaa
cagatgcatacaccaccaactcagcagagttcagcaggatgcgtttttccacaagaaatt
tatggtccaccactacgatttgagtctcctgcggcagctattttgtcaccacataatgaa
gaattttacaattacaatgttccaccagccagcacaaatccacccctgccagaacctggt
tattttactaagccttccacagcaatgcagcactccaaacaagaagttccaaaagtgtct
gattttggaaaaggttgcttaggacagtcaacatctgaaggtcaaaaaccatctccattt
actgtaccaatgcagtctactccagcatcatcaactttcaagtttaactccaactttaaa
tccaacgatggggattttacattttcatctagtcatgcaggagcaagtagtgcttatact
ggcagtgagagccttttagggcttctcacatcggatagaccaacccaagagcaaggtaaa
aaatctgattttgagaacattgccagtgatgaaaaaaacatgttcagatttggggaaaaa
agcttttcaccaggtttcactgtaactggaacacaaagccaagataagaatcctttagtc
tttggccaaagtgaaaatatttttacctttaagactcctggaaaatctacatttaagccc
ccaacatttggtacccaaactaaagatgcacataaccacagtgtggaatcagatgcagga
agtgaacatgttgctgatgatgatgggccacactttgagcctattatacctctccctgaa
aaagttgaagttaaaacaggagaagaggatgaagaagaaatgttttgcaatagagcaaaa
ctatttcgatttgatgcagaaactaaagaatggaaggaaaggggtattggaaatgtgaag
attttaagacacaggttgtctggcaagattcgcctgctaatgagacgtgaacaggtgcta
aagatttgtgcaaatcactacataaatgcagatatgaaactgaagccgaatgccacatca
gataagtcttatgtgtggcatgcttatgactatgcagatgaaatgcccaaaccagagcag
cttgctattcgatttaaaactgtagatgaggctgctcatttcaaggcaaaatttgaggaa
gcgcaaaggctactggctatggcagaagcccctgctatttcagctcaacataaaaatgca
aaagacaacctaaagttagatgctagcaaggtaaaagaagcaccccttccttttggatca
caattcattttgaaaagaggagaatggcaatgtgattgctgccttgctacaaatgcacca
acttccacttcatgtgtgtgctgtcaaacgccaaacaaaaacaaaagcagctcaataagt
tctgtatgcatttctgcaccatcgtttacatttgttaaagaaagtgcaactaacaagctt
gcatttggtcagcagcttttgaaagataaagatcaatggacatgtagtaagtgttctcag
aaaaatgatgcaggagtcagccactgttcctcctgccaaacccaaagtcaagcgaaggct
ggcatttctcaacctaacatagccagttctggttttacaaataatacatctgctcagggt
gataacttggcagccgtatttggaaagaaagcaggtcagtgggattgcgatgtgtgttat
gttagaaatgaaccttcagcaaataaatgtatttcttgtcaaaatacaaagccattgagt
aaagttagtggaacccaagcagcatcattttcatttgctgctggtgctgataattcacaa
aagaattttggtgcccagtttgcaaagaaggaaggacagtgggattgcgatgcatgttat
gttagaaatgaacctttagcaactaaatgtatttcttgtcaaaatacaaagctattgagt
aaaactactggtacccaagcagcatcattttcatttgctgctgctgctgataattcacaa
aagaattttggtggccagtttgcaaagaaggaaggacagtgggattgcagttcatgtctt
gtcagaaatgaagcatctgctccaaactgtgtagcttgccatagtgccaatccacagata
acaaataaagatgtggtgccacctgccctgacaccatctgggtttaaatttgggcataat
gcagaggttggtaaaacacaacaaagtctatcagctatgttttcatgcaaacagggtcag
tgggaatgcagtacatgcttagttataaatgatgctgcaaaagacacttgtgctgcttgc
caggctgctaaacctggctcatctgccagtcaaagcaaagaggttccttctacctttggt
attaaagcaaattcatcgcagaattttggccaacctgctgcaggatttaattgtggtttc
tccgcaaaagggttcaaatttggtattagtgatgaaaaggcatcagcatcaaattttaca
tttaaagcccctgctaccaatgaagaaacaaagatggtaaaagatggcttcaactttcca
gtgtctgccggttccctttcttttaaatttggcatttctgagcctgataagacaaaggaa
atgtctactggtttcatgaagggtacttccacaaataataaaggttctgaaacagctgag
actactgcacaagctgaaaaaatacaacaaagccctgataaagttctcgggcagtctgta
cagagcttttcttttgctgatatcgcaaaaagtactgaaggaattgaatttgggaaagca
gaccccaattttaaaggcttttctggtgcagggcaaaaattatttacctccagcaatcaa
gtaaatgcatctaatgcacaggaggctgcagatgatctttacaaaactgaggaacgtgat
gacatccattttgaaccaatagtccaacttcctgataaagtggatcttataacaggggaa
gaagatgagaaaactctttattctcaaagggtaaaactgtacaggtttgatgcaacaagc
ggacagtggaaagaacgtggagtaggaaacttaaagattcttaaaaatgaagtcaatgga
aaactgagagtgctcatgcggcgggagcaagttcttaaagtgtgtgcaaaccactggata
acgactacaatgaatctgaaacccttaactggctctgatcgtgcctggatgtggctagct
aatgatttttctgaaggagatgcaaagttagagcagttagctgtaaagtttaaaacacct
gagcaggctgaagagtttaaaattaagtttgatcagtgtcagtgcctcttattagatatt
cctctgcagactccgcataagcttgtagacactggaaggacagctcatttgatacaaaaa
gctgaggaaatgaaaactggcctaaaagatctgaaaacatttttaacagataaagccaaa
cctttggatgactcaaatgcgattaacaccactgacctagagaaacaggcacttgcagat
ggcactgaaccaacgtatgagtgggacacatacgatatgagaggagatgcacatgaagag
actttagatgactctgtatatgcctctccactagcaagtagcccagagaagaaaaatctg
tttaggtttggtgacctatcaacatccggttttaattttagcttccaaccagaaccaagt
ccatcaaagtctccaacaaaattaaatcatagcagggtgtctgtgggtacagatgaggaa
tctgatgttacccaggaagaagagcgagatggccagtactttgaacctgttgttccttta
ccggatttggttgaagtaacaagcggggaagaaaatgagcaggcaatcttctgccataga
gcaaaactttacaggtttgataaagactcaaatcagtggaaggaaagagggattggggat
ttaaagattttacagagattggataataaatctgcccgagtggtgatgagaagagatcag
gtactgaaactctgtgccaatcatcgcataacaactgatataaacctacagccaatgaag
ggggctgaaagagcctgggtatggactgcgcatgacttttctgaaggagaaggaaaagta
gaatgttttgctgtacggtttaagctacaggaggctgctgacttgttcaaagaggtgttc
gaagaggctaaagaggcacaagcgaaagactgtttgctcactccagtttcttctcgtggt
acaacaccaagagctgcttcatgtggtaaagctgccatagcaatactagaggagactaca
aaagagagaacagatcagcagcctgaggaagacacatccctcacagaagctagcacacca
tctcctacagatcagcctgcaaaggccctggtttctcctgcaaactttacgtttggatcc
gatgttgtaaagaatatctttggtagtgagaagcaggtgccttttgcatttggcaacaca
tcatccacagggtctctgtttggcttcagcttcaacgcttctcaaagccagggtcaacaa
gtgcagaagcagcctcccaaagttacgctggattttaatgctacatttaaggatgcagag
acaacaaatgctctccagaagccttctcaaagcagtggccagagtcctatagtttcttct
ctgtcatcatcatcatcctcctcatcatcaacccttatgcagcccatgccagccagagat
aaagctgctgatgtccctgatgcagatagctcttctgatgtactcattgtatatgtggcg
acccctacccctgagcagaaagccttagcagaaacactgcttttgcccttaacatttttc
tgctacaaaaacaagcctggatatgtcagtgatgagagcgacattgatgatgaggacttt
gagactgctgtaaaaaatctgaatggtattttgtatacagaagataagaaagataaggca
tcatcaagactttcaggttgtagcaaggaacctacagctgaatctgatcaggattgtata
atcgtttgggaaaagaagcccactcctgaagaaaaagccaaagcagacagtctgaagctc
ccaccaacgtttttctgtggtttgggtagcgacacagatgaagacaaggataatctagaa
gactttgatacagaagttagaaaagttaaggaggctaaaggagttccagaagcagatgta
actagttcccctgaagctgccatagtaagtgcagctgaaaccagtgtgtctctgccccca
aaacaagaacctgattccaccacaagcatttcccaggaacctgtagacttgtcctctaaa
caggagctccccaaaacagactcaaaagggttttctactcctagtttctcttttgggctg
ggtgaagtttctggagtttcttttgcagatttagcatctacgaattctggtgattttgcc
tttggttctaaagataccaacttccagtgggccaataccggggcagccgtttttggtact
ctgtcccagaacaaaaagggtgaggatgcggatggtagcgatgaagaagtggtgcacagt
gatgatgtacactttgagcccattgtgtctttaccagaggtggaggtaaaatcaggggaa
gaagatgaagagatccttttcaaggagagagcaaagttgtaccgctgggatagagctgtg
ggccagtggaaagagagaggagttggtgacataaaaatcctttttcacaaagagaaggga
tattatcgtgttctgatgcgtcgagaccaagtactgaaagtgtgtgctaatcacgtcatt
tcaactgaaattaagattagcaccttaagtacatcaaacaactcactggtatggacagca
acggactattcagatggtgaaggtaaagtggaacaactggcagtcagattcaagactaag
gagttgaccgattctttccagaacaaatttgaagaatgccagcataatttgcaagaagag
tctaatcctcaacattaa

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