KEGG   Xenopus laevis (African clawed frog): 108697539
Entry
108697539         CDS       T01010                                 
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108697539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xla03000]
    108697539
   04121 Ubiquitin system [BR:xla04121]
    108697539
   03036 Chromosome and associated proteins [BR:xla03036]
    108697539
Enzymes [BR:xla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     108697539
Transcription factors [BR:xla03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    108697539
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     108697539
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108697539
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     108697539
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC Cupin_8 F-box PHD C1_1 Cupin_1 SR-25
Other DBs
NCBI-GeneID: 108697539
NCBI-ProteinID: XP_041427131
UniProt: A0A8J1LCC4
Position
7S:complement(49493935..49659199)
AA seq 1136 aa
MEEEQLRYSRRLRHILRRRYEDDGISDDEIEGKRTFDLEEKLISNKYNFNFITYMDGKDF
NMKFIQEGGLRVPIIFTSSEGLGIKMPDPSFSVNDVKMFVGSRRIVDVMDVGTQKGTEMT
MAQWAKYYETPEEERGKLYNVISLEFSHTKLENLVQRPTTVDQIDWTDNIWPRHLKDRQT
ESTNVIQEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHILRGGKVFWLIPPTDQNLE
LYENWLLSGKQGDVFLGDRATECQRIELKQGYTFVIPSGWIHAVYTPQDTLVFGGNFLHS
FNIPMQLRIYSIEDRTRVPTKFRYPFYYEMCWYVLERYVYCMTQRSHLTKEFQRESLSID
LELNGRQRPDTPSLSSSASSELSSSSDNDDSSDQDWEEEGSLKKRERDRLRVEHELQRRR
NRDRQQRDQERDHQHAERIIIHTLPASLRPLTPPPSLPLPTPDSPPSTSPYLTWFEIEGL
HCLVLKLESLPPHKKCLPDGIHDPEALISDIKSLLEDHSHDPPELALTGVPIVQWPKRNQ
YKVHLRPKIQFTKPHTMRPASRHSTAPPRTLGTPSGTTASSGARRRRVRCRKCQACVQRE
CGTCHYCKDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCALCGEVDQTNDTQDFERKLME
CSVCNEIVHPGCLEMDGEGLLSDELPNYWECPKCYEGQKHTMQPNHDHIELHSKRKAADY
ESSHFYPAKVLRPPLGQSPPSPPLLLPPSPSSAPPTPPSSQTQVPPASREERAKRRQLTR
EKENHPTGCDQSEGDRLRLRGPYLAVTLQRSPKELSFTSIVPKLQAITPNPRQPMHAAPP
QHPDEEEEEEETENSLILGQRKNNISMQKVVWLSVFHYLTHEELCICMTVCKSWYKWGCD
KRLWSKIDVSRCKSLVPQALSGINKRQPVYLDLSWTNASKKQLIWLINRLPGLKDLILAG
CTWSAVSALASCRCPLLRTLDLRWTVGIKDTQIRELLTPASDKTGHDSRSKLRLLTDLRL
SGLDISDVTLRLIMRHCPLLSKLDLSHCPLLSDQSVNLLTAVGSSTRGILTHIHLAGCKG
VTDESLLYLRRATNLSLIDLRGCKQVTRGACEGFISDLSVSILYCLSDDNLIQRIT
NT seq 3411 nt   +upstreamnt  +downstreamnt
atggaagaggagcaactgcgatacagccgcagattgaggcatatactacgtcgccgttat
gaagatgatggcatatctgatgatgagattgaaggaaaaagaacctttgatttggaggaa
aaattgataagcaacaagtacaactttaactttattacctatatggatggcaaagatttt
aacatgaaatttattcaagaaggtggactcagggtcccaatcatttttacaagttctgaa
ggacttggcatcaaaatgcctgatcctagctttagtgtgaatgatgtcaagatgtttgtt
gggagtaggcgtattgtagatgtcatggatgtcggcactcaaaagggcacagaaatgaca
atggcacaatgggcaaaatactatgagactcctgaagaagaaaggggaaaactatataat
gtgatcagcctggagtttagccacactaaactggagaatctggtgcagaggccaacaacg
gtggatcagattgattggactgataacatctggccaagacatctaaaggacagacagact
gaatccacaaatgtaattcaggagatgcaatatcccaaagtacaaaagtattgtctcatg
agtgttcgtggatgttatacagattttcatgtggactttggtggcacatctgtgtggtac
cacatactaaggggaggcaaggtgttttggctaatacctcctacagatcaaaatctggaa
ctctatgagaattggctgctctcgggcaaacaaggtgacgtttttcttggggacagagca
acagagtgtcagcgaattgaactaaaacaaggctacacatttgttattccctcaggatgg
attcatgctgtgtacacacctcaggacacactggtgtttgggggaaattttctgcacagc
ttcaacattccaatgcaacttcgtatatatagcatcgaggacaggacgagggtacctaca
aaattccgatatcctttttactatgaaatgtgttggtatgtgcttgaaagatatgtctat
tgcatgactcaacgctctcatctcacaaaggagttccaaagggagtctctgagtattgat
ttagagcttaacggtcgccagagaccagacactccatccttatcctcatccgcttcatct
gaattatcgtcttcctctgataatgatgattcctctgatcaagattgggaggaagaagga
agtcttaagaagagggaaagagatagacttagagtggagcatgaacttcagaggagaagg
aacagggataggcaacaaagagaccaagaaagagatcatcaacatgctgagagaataatt
atccatactctacctgcgtcactacgtcctttaactccaccaccttcccttcctctgcca
acaccagattcacctcccagcacttctccttacttgacatggtttgagattgaaggatta
cactgtcttgtgctgaaacttgaatccttgccacctcataaaaagtgcctaccagatggt
atccatgacccagaagctcttatctctgatatcaagagtcttcttgaggaccactctcat
gatccacctgagcttgcactcactggcgttccaatagttcagtggcccaagagaaatcag
tataaggtccaccttcggcccaagattcagtttacaaaacctcacactatgcgtccagct
tcccgtcactccacagctcctcctaggacattaggcactccatctggtactacagcttct
tcgggtgctcgaaggcgtcgtgtcaggtgtcgcaaatgtcaagcttgtgtccagcgagag
tgtgggacttgccactactgtaaggatatgaagaagtttggagggccaggccgtatgaaa
caatcttgtgtactaaggcagtgccttgctcccagactgccccattctgtaacctgtgct
ttgtgtggggaggtggatcaaacaaatgacacacaggattttgaaagaaaactcatggag
tgttcagtttgcaatgaaattgttcacccaggatgtctagagatggatggtgaaggactt
ctaagtgatgaacttccaaactactgggagtgccccaaatgttatgaggggcagaagcac
acgatgcaaccaaatcatgatcacatcgaactgcacagtaaacgtaaagctgctgactat
gagagcagccatttctaccctgccaaagttctgcggcctccactggggcagagcccccca
tccccacctcttttgctcccaccttctccttcatctgctccacctacaccaccctcttcg
cagacacaagtcccacctgcaagccgagaagagcgagcaaagaggcgccaacttactaga
gagaaagagaaccacccgactggatgtgatcagtctgagggagatcgcttgcggcttagg
gggccctacctcgcggtcactcttcagcgttcaccaaaagaattaagcttcacttccatt
gtccccaagttacaagccatcacaccaaatccccgtcagcctatgcatgcagctccacca
cagcatcctgatgaggaagaagaggaggaagagacagagaacagtctcatactgggtcaa
agaaaaaacaacatatcaatgcagaaagttgtttggctctctgttttccattacctcaca
catgaagagctttgcatctgtatgacagtgtgcaaatcctggtacaaatggggctgtgac
aaacgtctctggtccaagattgatgttagccgctgcaagtctctagtaccacaggctctc
agtggcattaataaacgtcaacctgtatatcttgacttgagctggacaaatgcatcaaag
aagcaacttatatggcttatcaaccggttgccaggtctgaaggatttaatccttgctggg
tgcacttggtctgctgtctctgcccttgctagctgcagatgtcccctcctgcgtactctg
gacctgcgctggactgttggaatcaaagatactcagattagagagttgcttacaccagcc
tcagacaaaacaggacatgactctcgcagcaagctacgtctgctaacagatctgcgcctt
tctggccttgatatttctgatgttactttaaggttaatcatgcgccattgcccacttctg
tctaagcttgacctcagccactgtcccctgctttccgatcagtctgtaaacctccttaca
gctgtgggctcttctacaagaggaatactcactcacatacacttagcaggttgtaaaggg
gtgacagatgagtctcttctatatctacgacgtgccaccaacctgtcccttattgacttg
cgtggttgcaagcaggttactcggggagcttgtgagggatttatttcagacctctctgta
agcatcttgtattgtctatcagatgataaccttatccagaggatcacctag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (14)   
   UniProt (1)   
   RefSeq(pep) (13)   
DNA sequence (13)   
   RefSeq(nuc) (13)   
Protein domain (11)   
   Pfam (11)   
All databases (69)   

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