KEGG   Xenopus laevis (African clawed frog): 108707604
Entry
108707604         CDS       T01010                                 
Symbol
nup98l.L
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108707604 (nup98l.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108707604 (nup98l.L)
   03036 Chromosome and associated proteins [BR:xla03036]
    108707604 (nup98l.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108707604 (nup98l.L)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108707604 (nup98l.L)
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nup98_GLEBS Nucleoporin_FG
Other DBs
NCBI-GeneID: 108707604
NCBI-ProteinID: XP_041438688
Xenbase: XB-GENE-22169582
UniProt: A0A8J1MAR3
Position
2L:180871587..180935030
AA seq 1793 aa
MFNKTFGSPFGTGNGAFGATSTFGQTTGFGTTPAAAFGSAGFGTNTTTGGLFGNTQTKPG
SLFGANTFNQPATSSASSGFGFGASTGTTNSLFGSTNTGSSLFSTPSNAFAQTKPASFGN
FGTSTSTGGLFGNTNTANPFSGTSASLFGASTFSSAPTGTTIKFNPQSGTDTMAKGGVTT
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNPVGAPAGTGLFGTSAATSSAPTG
IFGSTAANSFSFAGNKTTFGAAGTGAFAANTGGLFGQPTNPPAASLFNKPFGNAATTQST
GFSFGNTSTLGQAQTSTMGLFGANQATQAGGLFGATTNTNAAGAFGAGSSLFGQPNPAPF
GGGSTLFGNKPAGFGTTTTTAPAFGTTTGGLFGNKATLTLGTNTNTSNFGFGANAAGTSL
FGNKPATGTIGPSLGTSFGTALNPGQTSLFGGNQPKLTGTLGTGAFGGTGFNSTSTGLGF
GAPQPAMATLTDPNASAAQQMFLQQQYNALRYSPFPDSPLFRNPISDPKKKEELLKPTNP
AAQKAVLTPTHYKLTPRPAARVRPKALQNSGAAKSQLFDALDDDEPVLSSGVFMPKKSIK
KLDLKYLKNSSSLFAQESKDVNEVVPPTPETQDRSVENHHADEENDEEIAATYPSPFSRP
LPQSQEKKQVNNMDDTIVALNMRKSGRIGLDHSGEDASFNEDSLRDTDILDASPHPAGIT
LTRDSYYTIPSMEELARSVDENGECIVNGFTIGREGFGSIYFEGIINLTNLDLDSIVHIR
RKEVIVYVDDQNKPPLGEGLNRPAQVTLDEVWPIDKTTRCMITSPERLNEMNYKAKLENA
SRKQGAQFVDYRPESGSWVFKVNHFSKYGLQDSDEEDDQLNNAEAKKLKTAPVPPQGKQP
PLQQATLAGKVTPPPQSPAVDQLDRVLELDSDMADITQDQDLDSVAEEQDLIEEQEMLSA
SSHIASSLGINPHALQVMKASLLLEEEDGEMINRFSNFPSSLDPYPDVRSPRLFPSSQSK
RTSSMGLLQSKFASPSMSRISETAQGSHSPRILPAANLVAPWSVPAPLAPTFVIPSPAPE
THLRTVGTRRQQELVPLEKSVTHGRGTLLIDMGLFMGRSFRVGWGPNWTLVHNGDKLSER
LNAEEDRNMDTIDYGFLPKPTSAKSVTESPFKVHMEKLSLEQKTKELQSYLMPLEIELKN
SSVDRSAQCPHFKPNTGVTAIHDYAGWVRNLSNETGEVEAVVKQWGLTWTLCESLWGQLK
ELEASLDEPNEFVRNLERRKAFSHWLAHTAEERIEEEVSLYGPERHIEAIFSFLTGGRIS
DACCLAQKSGDHRLSLLLSQMVGSQEVRELITLQLVDWNKLQVDHYIQEERLRVFCLLSG
TPVWRSSDNKSINVCSQLDWKRTLAVHLWYMLPPTATIAQALRMYERAFQEHEEGEPYAC
YPLPPYLEDCGISLWDEPSAKFSSLQRDVCVHLLKLYSERQYDLCQLLDPSSVTPDPLDY
RLSWHMWMVLQALNYTHLSEHRQGTLHASYAAQLENVGLWEWAIFVMLHIPHPHVREAGV
RELLNRHCVVQDSPESLAKETFLIQQLCVPAQWIHEAKAIRSRRDGDKLKEALYLLKGHQ
WNPCHKLVTRHLAADAVINENYRYLKSFLGEMSKPEHCKHIQEWESAGKVYLDYISVIDM
LRHIQHDERSGCELEKLHTKVMSLCKWVELIQCYNAKDRLAQSEMAKRVANILRVVLSLQ
QPPESMSDSSSEPRVPLRLLAPHIGRLPMPEDYALEELRGLTQSYLRELICGS
NT seq 5382 nt   +upstreamnt  +downstreamnt
atgttcaataaaacatttggaagcccctttggaactggcaatggtgcgtttggcgcaact
tcaacttttggccagacaactggctttggtaccacccctgccgcagcatttggctctgcg
ggttttggcacaaacacaactaccgggggcctgtttggaaacacacagaccaagccagga
agcttatttggagccaatacctttaaccagccagcaacttcctcggcaagctccggcttt
ggctttggggcctcaactggtacaacaaacagtttatttggctcgacgaacacaggcagc
agcctcttctccacaccgagcaatgccttcgcacagaccaaacctgcgagctttggaaat
tttggaacaagcaccagcactggaggcctctttggcaacacaaataccgcgaatccattc
agtgggacgtctgcatctctgtttggcgcatcgaccttctcttctgctccaacaggaacc
acaattaagtttaatccccagtctggcacagacaccatggctaaaggaggagtgaccact
aacatcagcaccaagcaccagtgtattactgccatgaaggagtatgagagcaagtcgctg
gaggaacttcgccttgaagattaccaggcaaataggaagggcccacagaatcctgttggt
gcacctgcaggaaccggcttatttggcacctcggcagcaacttccagcgctccaacaggg
atctttggctctactgcagcaaacagcttctccttcgctgggaataaaactacatttggt
gctgcaggcacaggcgcatttgcagcaaatacagggggtctctttggccagcctactaat
ccaccagctgccagcttgtttaacaagccctttgggaatgcagcgaccacacaaagtacc
ggcttttcatttgggaacacaagtacactggggcaagcacaaactagcactatggggctc
tttggagcaaaccaagccacacaggctgggggtctctttggggcaacaaccaatacaaat
gctgccggtgcatttggagctggaagtagcctgttcgggcaacctaatcctgcacctttt
ggcggcggctcgaccctgtttggtaacaaacctgctggtttcgggacgaccacgaccact
gcccctgcatttggcactaccactggcgggctctttggtaacaaagcaaccctgacttta
ggaaccaatacaaacacttccaattttgggtttggcgcgaacgccgcaggaaccagcctg
tttggcaataagccagcaacggggaccatcgggcccagccttgggacaagttttgggaca
gctctaaaccctggccagacttccttgtttgggggcaaccagcctaagctgactggtacc
cttgggacaggcgcatttggtggtaccgggtttaacagcacctcaacaggcctaggattc
ggagcaccacagcctgcaatggcaactctgactgatcccaatgcttcagctgcacagcag
atgttcctacagcagcaatacaatgcacttagatattccccgttccctgactcccctctt
ttcaggaacccaatctctgatccaaagaagaaagaggagctcttgaaacccaccaaccct
gctgcccagaaagctgtactgactcccacacactacaaactaactcctcgcccagcagcc
agagtacgtcccaaagctttgcagaacagcggagcagccaaaagtcaactctttgatgcc
ttggatgatgatgagcccgtcctgtctagcggtgtgttcatgcccaagaaaagcatcaag
aagctggacttgaagtatctgaagaacagcagcagtctatttgcccaagaaagcaaagat
gtgaatgaggtggtgccgccaactcctgagactcaagacagatctgttgaaaaccaccat
gcggatgaagaaaatgatgaagagatagccgctacgtacccatcccccttctccaggccc
cttccacaaagccaggagaaaaagcaggttaacaacatggatgacaccattgtagcactg
aatatgcgcaagtctgggcgaatcggactggaccacagcggcgaggatgcctcctttaat
gaggattctcttagagatacagacattcttgatgcttctccccaccctgcaggaattacc
ctaacgagggacagctactacaccatcccatccatggaggaattggccagaagtgtggat
gagaatggggaatgtatagtcaatggcttcactattggacgtgaagggtttggatcaatc
tactttgaaggaatcattaacttgaccaatttagatcttgattcaattgtacacatccgc
aggaaggaggttattgtgtatgttgatgaccagaacaagccccctcttggtgaaggtttg
aacaggcctgcccaggtgaccctagatgaagtctggcccattgataagaccacgcgctgt
atgattacaagccccgagcgcctgaatgaaatgaactacaaggccaagttagagaatgct
tctcgtaagcagggggcccagtttgtggattatcgcccagagagcggttcctgggtgttc
aaggtgaatcacttctccaagtatggattgcaggactccgatgaggaagatgatcagctc
aacaacgctgaggcaaaaaagctgaaaactgcccctgttcctcctcaaggcaaacagcct
cctctccaacaagcgactctcgctggaaaagtcacccctccaccccagagcccagcggta
gatcaacttgatcgggtacttgaactggacagcgatatggccgatattacccaggaccag
gatctggattctgttgcagaggagcaggacctcattgaagaacaggagatgttatctgca
tcttcccacattgcttcttccctgggtattaatcctcatgccctgcaggtgatgaaagct
tcgctgctactggaggaagaggatggagaaatgattaatcgcttcagcaatttcccttct
agtttggacccatacccagatgttcggtcgccccgtcttttcccatcatcccagtcaaaa
aggacttcctctatgggactgctgcagtctaaatttgcatctccctccatgtcccggata
agcgagactgctcaaggctcccacagtcccagaatccttccggctgccaatcttgttgca
ccttggtcggtcccagcacccttagctcccacctttgttatacccagccctgctcccgag
actcacctgaggactgtgggaaccagaaggcaacaagagctggttccactagagaagtcc
gttacacatgggcgcggcactcttctgatcgacatggggttgttcatgggaaggtcgttt
cgtgttggctggggccccaattggacccttgttcataatggtgataaactaagcgagcga
ttgaacgcagaagaagaccggaacatggacaccatcgattatgggtttctgcctaagcct
acgtctgctaaatctgtcacagagtcgccctttaaagtccacatggaaaagctgagcctg
gagcagaagactaaagagctgcagtcgtacttgatgccactggagatagagctgaaaaac
agcagtgtggatagatccgcccagtgcccccactttaagccaaacacaggagtcactgct
attcatgactatgcaggctgggtcaggaacttgtccaatgagactggagaggttgaagcg
gtcgtgaagcagtggggcctgacatggaccttgtgtgaatctctctggggccaactgaag
gagctggaggccagtctagatgaaccaaatgagtttgtgaggaacctagagaggaggaag
gctttctctcattggctggcacacaccgcagaggaacgtattgaggaggaggtgtctctg
tacggcccagagcgacacatagaagccatctttagcttcctaactgggggcaggatcagt
gacgcgtgctgtctggcacaaaaatctggtgatcataggctgtccctgctgctctctcag
atggtgggtagccaggaggtgcgggagctgattaccctgcagttggtcgactggaataag
ctgcaggtggatcactacatccaggaagagaggctgcgtgttttctgcttgctctctggc
acacctgtgtggcgctcttctgataacaaaagcataaatgtatgttctcaattggactgg
aagcgaaccctggccgttcatctctggtacatgctccctcccactgccaccattgctcag
gccttgagaatgtacgagcgggcttttcaggagcatgaagaaggggagccgtatgcctgt
taccctctccctccctatttggaagactgtggcatcagcctctgggatgaaccttcagcc
aaattctcctccctgcagagagatgtctgtgtccatttgctgaaactgtacagtgaaagg
caatatgatctgtgtcagctgttggaccccagtagtgtgaccccagatcctctggactac
agactcagctggcacatgtggatggtcctgcaggctctcaattatacccatttgtctgag
catcgccaggggacgcttcatgccagttatgctgcccagctggaaaacgtaggactctgg
gaatgggccatatttgtaatgctgcacatcccacatccacacgtccgtgaagcaggtgtc
cgggagttgctgaataggcactgtgtggtgcaggacagcccagagtctctggcaaaagag
accttcctaattcagcaactctgcgtcccagcgcaatggatccacgaagccaaagcaatc
cgctccaggcgggacggagacaagcttaaagaggccttgtatttactaaagggccaccaa
tggaatccctgccacaaattggtgacccgacacttggctgcagatgccgttattaacgag
aactacagatacctgaagagctttctgggtgagatgtccaaaccggagcactgcaagcac
attcaggagtgggagagtgcagggaaggtgtatctggattatatcagtgttattgacatg
ctccgtcacattcagcacgatgagaggtccggctgtgagttggagaagttacacaccaaa
gtgatgtctctgtgtaaatgggtcgagctgatccagtgttacaatgccaaagatcgcttg
gcacagtcagaaatggcgaaacgcgttgccaacatccttcgagtggtgctgagtctgcag
cagcccccagaatccatgtctgactcttcgtctgaaccccgtgtgcccttaagactgctg
gccccacacattggccgcctcccgatgcccgaagactacgccctggaggaactccgaggc
ctcacacagtcctatttaagagaactgatttgtggcagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (49)   

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