KEGG   Xenopus laevis (African clawed frog): 108718677
Entry
108718677         CDS       T01010                                 
Name
(RefSeq) ATP-dependent RNA helicase DHX30 isoform X1
  KO
K13185  ATP-dependent RNA helicase DHX30 [EC:5.6.2.6]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    108718677
   03029 Mitochondrial biogenesis [BR:xla03029]
    108718677
Enzymes [BR:xla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108718677
Spliceosome [BR:xla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    108718677
Mitochondrial biogenesis [BR:xla03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    108718677
SSDB
Motif
Pfam: Helicase_C OB_NTP_bind HA2_C DEAD HA2_N
Other DBs
NCBI-GeneID: 108718677
NCBI-ProteinID: XP_018122506
UniProt: A0A8J0VFK9
Position
6L:5789320..5798530
AA seq 840 aa
MAAPWLVNAVLRRLLSRVPGQPIRLRSSGKFEAEPLRREEEECGAEAAGDMGREAKGLLK
EFSEPKSLLNRVISRALRTSHTRDTLLYIHRSSAGENKVTLRLKWPKHMEIEARGPKKID
AERQVADMACKIFQKLGLLGPRNEPFECSKYKELAGHFHTQECGLPGQTRSMLPPRGGAL
LFCTVGVLLKKLQSNPTLEGVSHVLVDEVHQRDVNTDFLLILLKKVQQQNPQFKVVLMSA
TGDNERISRYFGGCPIIRVPGFMYPVQENYLDDVAAMLGRSADELIKANMEECAPDLDLI
SSVVQHIADNGPPGGILCFLPGWQEIRGVQQRLEENEHRAKEKFLILPVHSNIPMMDQQS
MFQRPPPGVRKIVLATNIAETSVTVDDIVHVIDSGRQKEQRYDLRTKVSCLETFWVSKSN
VTQRRGRAGRCQPGFSYHLFTREQHQSMASFQLPEILRTPLESLVLQAKVHVPEMTAVEF
LSQALESPDPHAIADAVRLLQEIRVLNSDEQLTLLGHRVSNISTDPKLAKAIVLASIFRC
LHPLLIIVACLTRDPFQSGLQNRAQVNRAKKSLSGESCSDHMAYVRALQGWEEVLSQRNG
TARENFLETHTLSPGALRFIQGLISQFSSNVSDAFLVSDASECRDQNSQYNQFSHKNELV
KAVLLAGLYPNLVHVKRGFVTKGKFKPNSLLYKTREGAVLLHRTTINRDEKHLTSPWLTY
FQAVKSSGSVFVRDSSMVHPLAVLLLADSSVILKDWGQQLVISLSDCDLLKVESDRRTIA
LLNDLRLALTRMVGRSLSQELPEFPAQEQAEHEHLISILVQLLNSTAHSFRDRAETLPEE
NT seq 2523 nt   +upstreamnt  +downstreamnt
atggcggctccctggcttgtcaatgctgttcttcgccggctcctgagcagagtccctggg
cagccaattcgcctgcgctcctcggggaagtttgaggctgagccgctcaggcgggaggag
gaggagtgtggggcagaggccgcgggagacatggggagagaagccaagggtttgctgaag
gaattctcggagcccaagtccctgctgaacagagtcatctcccgagccctaaggacgtcc
cacaccagagacacgttgctttatatccaccgcagcagcgccggcgagaataaagtgacg
ctgcggctaaaatggcccaaacacatggaaatcgaggcccgtgggccaaagaagatcgac
gcagagcgacaggtggccgacatggcctgtaagatattccagaaacttggcttgttgggc
cccaggaatgagccctttgagtgcagtaaatacaaggagttggccggccacttccacacg
caggaatgtgggctaccaggtcagactagaagtatgttgcctccccgcggaggggccctc
ctcttctgcaccgttggggtcttactaaagaaactgcagagcaaccccactctggagggc
gtcagtcacgttctggtggatgaggtgcaccaacgagacgtcaacacagactttctcctc
atcctcctgaagaaggttcagcagcagaacccgcagttcaaggtggtgctaatgagcgct
actggggataatgagcgaatatccaggtatttcgggggctgccccattataagggtgccg
ggatttatgtatccggtgcaggaaaattacttggacgatgttgccgccatgttgggcaga
agcgctgatgagctcattaaggccaatatggaggaatgtgcacctgacctggatctgatc
agcagtgtcgtacaacatattgctgacaatgggccgccaggggggattctctgttttctc
cccggctggcaggaaattcggggggtgcagcagagactggaggagaatgagcatcgagcc
aaggagaagttcctcattttaccagttcactcaaacattcccatgatggaccagcagagc
atgttccagcgcccgccccctggagtccggaagattgtcctggccactaacatcgctgag
acttcggttacagttgatgacattgttcatgtgattgacagcgggagacagaaggagcag
cgctatgacctcaggactaaggtttcctgtttggagacattttgggtgtccaagtcgaat
gtgactcagagacgcgggagagccgggcggtgtcagccgggattctcttaccacctcttc
acccgtgagcagcaccaatcaatggcctccttccagctgcccgaaatcctgcgcaccccc
ctggagagcctggtactgcaggccaaggttcatgtgccggagatgacggcggtggagttc
ctgtctcaagctttggaaagtccagacccccatgcgattgctgatgcagtgcgactcctg
caggaaatccgggtgctgaatagtgacgagcagctgacgttactgggccacagagtttcc
aacatctccactgaccccaaactggccaaagccatcgtcctggcctccatcttccgctgc
ctccaccccctgctcatcatcgttgcctgtctcaccagagaccccttccagagtgggctg
cagaatagagcgcaggtcaacagagcaaagaagtccctgagcggagagtcgtgcagtgat
cacatggcgtatgtacgagccttacagggatgggaagaggttctgagtcagagaaatggc
accgcccgggagaacttcctagagacccacacgctctcccccggggccctgcgcttcatc
caaggtctcatctcacagttttcctccaatgtgtccgatgccttccttgtgtctgatgcc
tccgagtgcagagaccagaactcccagtacaaccagtttagccacaagaatgagctggtg
aaggctgtgctcctggctgggctctacccaaacctcgtccatgtcaagcgcgggtttgtc
accaaagggaaattcaagcccaacagcctcctgtataagacgagggaaggggctgttctc
ctccacaggaccaccattaacagggatgagaagcacctcactagcccgtggctcacttat
ttccaggcagtgaagtccagcggcagcgtctttgtgcgggacagttccatggtgcacccc
ctggccgtgctgctattggccgacagctccgtcattctcaaagactgggggcagcagctg
gtgatcagcctgtcggactgtgacctcctgaaggtggaaagtgaccgtcgcactattgcg
ctgctgaatgatttgcgcctggccctgacgcgcatggtggggcggagcttgagccaagag
ctgccagaattccctgcacaagaacaagcggagcacgagcatctgatctccatattggtg
cagcttctgaacagcaccgctcacagctttagggacagagcggaaaccctccctgaggaa
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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