KEGG   Xenopus laevis (African clawed frog): 378615
Entry
378615            CDS       T01010                                 
Symbol
hdac9.S, hdac9, hdac9-A, hdrp, MITR
Name
(RefSeq) histone deacetylase 9
  KO
K11409  histone deacetylase 9 [EC:3.5.1.98]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    378615 (hdac9.S)
Enzymes [BR:xla01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     378615 (hdac9.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     378615 (hdac9.S)
SSDB
Motif
Pfam: HDAC4_Gln
Other DBs
NCBI-GeneID: 378615
NCBI-ProteinID: NP_001079307
Xenbase: XB-GENE-865808
UniProt: Q9YGY4
Position
6S:30524447..30798301
AA seq 565 aa
MIGKDIKSEFPIGLESISPLDLRTDLRTAVPVGDPGLREKQLQQELLIIKQQQQIQKQLL
IAEFQKQHENLTRQHQVQLQEHLKLQQELLAMKQQQELLEREKEQKMEQQRKEQEAERHR
QEQQLCHPRSKDRVKERAVASTEVKQKLQEFILSKSATKEPLTNGTSHSMGRHPKLWYTA
AHHTSLDQSSPPPSGTSPTYKCPPPGNQDDFPLRKTASEPNLKVRSRLKQKVVERRSSPL
LRRKDSIVSSSYKKRIFEVAESSVSSSSPVSGPSSPNNGPVAMEAEHETPVLSVNSRIEN
LVSHHHLVHHERSLSLLNLYTSPSLPNITLGLHATATQLNTSSSLKEQQKYDPQAPRQGV
SMAGQYAGGIPTSSNHVSLEGKANSHQAILQHLLLKEQMRQQKILASGGTPVLHQSPLAA
KDRVSPAGRVAHKLPRHRPLHRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNK
ILSKSIEQLRQPEGHLEEAEEDLHGDNLMQEKSSSIDNTRSYSSTDLRTGPFGSVKVKEE
PPDSENEIKTHLQSEQKSVFAQQVT
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgatcggcaaagatataaagtctgaatttcccattggcctggagtccatctccccttta
gacttaaggactgatcttaggacagcagtgcctgttggtgatccaggtctgagagagaaa
cagctgcagcaggagcttctgataattaaacagcagcagcaaatccagaagcaacttcta
attgcagagtttcagaagcagcatgaaaacctcacaaggcaacaccaggtccagctccag
gagcacctcaagctgcagcaagaacttttagcaatgaagcaacagcaagagctcttggag
agagagaaggaacagaaaatggagcagcagagaaaagaacaggaagcagaaaggcatcgc
caggagcagcaattgtgtcaccctcgaagcaaagacagggtgaaagaaagggcagtagcc
agtacagaggtgaaacagaagctccaagagttcatactgagtaagtctgcaactaaagaa
cctttgacaaacggaaccagtcattccatgggacgccacccgaagctttggtacacagca
gcacatcatacatcactggatcaaagctcgcctccgcctagtggtacgtcgccaacatat
aaatgtcctccaccaggaaatcaagacgacttccctttaaggaaaacagcatcagaaccc
aacttgaaagttcggtcccgtttgaaacagaaagtagtggagagacggagcagcccttta
ctgagaaggaaggacagcattgtttccagctcatacaagaagagaatatttgaggttgca
gaatcttcggtgagtagcagctctccagtatctggacccagctcaccaaataatggtcca
gtcgccatggaagcagaacatgaaacgcctgtcttgtcagtgaattcccgtatagagaat
ttggtttcacatcatcatcttgtgcatcatgaaagatctttaagtctcctaaacctgtat
acatctccttctttgccgaatattactttaggactgcatgcgacagctactcagcttaat
acctcatcttcattaaaagagcaacaaaagtacgacccgcaggcaccccggcagggggtt
tcaatggccggacagtacgccggaggcattccaacatcctcaaatcatgtttccctggaa
ggaaaggccaatagtcaccaggccatactgcaacacctactgctgaaagaacagatgcgt
cagcagaagattttagcttcaggtgggacaccagttctacatcagtcacctctggcagca
aaggacagagtttcaccagccgggagagtagcccacaaactgcctcgtcacaggcccctt
caccgaacccaatctgctcctctgccccagagtaccctggctcaactggttatccaacag
cagcaccagcagttcttggagaagcagaaacaatatcagcagcagattcacatgaacaaa
atactttccaaatctattgaacaacttcgacaacccgaagggcatcttgaagaagctgag
gaagatcttcatggagataatttgatgcaagaaaagagttcctccattgataacacaaga
agttacagcagtacagatcttaggactggaccttttggatctgtgaaagtgaaagaggag
ccaccagatagtgagaatgaaattaaaacacatcttcagtctgagcagaagtcagttttt
gcgcaacaggtaacctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (35)   

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