KEGG T01010: 380177

Xenopus laevis (African clawed frog): 380177

Entry

380177 CDS T01010

Gene name

capn1

Definition

calpain 1, (mu/I) large subunit (EC:3.4.22.52)

Orthology

K01367

calpain-1 [EC:3.4.22.52]

Organism

xla Xenopus laevis (African clawed frog)

Pathway

xla04141	Protein processing in endoplasmic reticulum
xla04210	Apoptosis

Class

Genetic Information Processing; Folding, sorting and degradation; Protein processing in endoplasmic reticulum [PATH:xla04141]
Cellular Processes; Cell growth and death; Apoptosis [PATH:xla04210]

SSDB

Motif

Pfam:

Peptidase_C2 Calpain_III EF-hand_7 EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_5

Other DBs

NCBI-GI:

NCBI-GeneID:

Xenbase:

UniProt:

AA seq 713 aa
MAEEVIVPVYATGISAQLQKQRDQDLGVGKHENAVKFLGQDYDRIRHECLQNGTLFKDDT
FPASAYSLGFKELGPNSSKTYGVKWVRPSQLVSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNETVLHRVVPHGQSFQENYAGVFHFQLWQFGEWVDVVIDDLLPVKDGKLVFVHS
ASGNEFWSALLEKAYAKANGCYEALSGGSTSEGFEDFTGGVTEWYEMKKAPKDLFNIILK
ALERGSLMGCSIDITSATDMEAVTFKKLVKGHAYSVTGAKEINFRGQNTKLIRMRNPWGE
VEWTGAWSDNSSEWNYVGQADSNELRIKMEDGEFWMSFEDFLREFSRLEICNLTPDALTA
RRYRKWNTTVYNGSWRKGSTAGGCRNFPATFWINPQFKIKLEEEDGDDDYGSETGCTFLL
ALMQKNKRKERRFGKDMETIGFAVYEVPREFLGQSGVHLKRDFFLQNASRARSEQFINLR
EVSTRHKLPPGEYIVVPSTFEPNVEGDFVIRVFSENKHGSVEMDDPLSADLPPEEVLSET
EIDQGFKNLFKQLAGADMEISYTELQSILNKIVSKHKDLRTTGFSLESCRSMVNLMDKDG
NGKLGLVEFNILWNKIKNYLTIFRKFDMDKSGSMSAYEMRLALESAGFKLTNSLHQLIIT
RYSEPDMAVNFDSFTCCLIRLETMFRFFQGMDTQKQGVINFDLFSWLQMTMFA

NT seq 2142 nt +upstreamnt +downstreamnt
atggctgaagaagtgatcgtgccagtttatgccactgggatttcggcgcagctgcagaag
caacgtgatcaagatctgggtgtagggaaacatgagaatgcagtcaaatttctgggacag
gattatgacaggattcgccacgagtgcctgcaaaacggaaccctctttaaggacgacaca
ttcccagcctctgcttactctctgggttttaaggagctcggcccaaactcatccaaaacc
tatggtgtaaaatgggttcggccttcgcaactcgtctccaacccacagtttattgtcgat
ggtgccacaagaacagacatctgtcagggagcattgggtgactgttggctcctcgctgct
atcgcctccctcacattaaacgaaacagtcctgcaccgtgtagtacctcatggccagagc
ttccaggagaactatgctggcgtctttcattttcagctgtggcagtttggcgagtgggtc
gatgtggttatcgatgatttgctccctgttaaagatggaaaacttgtgttcgtgcactcg
gcttctgggaatgagttctggagtgctttgctggagaaggcctatgccaaggccaacggt
tgttatgaggctctttctggaggcagcacatcagaaggttttgaggattttactggaggt
gttactgagtggtatgagatgaagaaagcacccaaagatctgtttaacattattctgaag
gcactggagcgaggttccctcatgggctgttccattgatatcactagtgccactgatatg
gaagccgtaacattcaagaagcttgtaaaaggtcacgcatactctgttacaggggccaaa
gagatcaactttaggggtcagaacaccaagctgattcggatgcgaaacccatggggtgag
gtggaatggacaggcgcatggagcgataattcatctgaatggaattatgtgggtcaagca
gacagtaacgagttgagaataaagatggaagatggagaattctggatgtcttttgaggac
ttccttcgtgaattttcccgccttgagatttgtaacctcactccagatgcactcactgcc
cgcagataccgcaagtggaacacaacagtgtacaatggttcttggaggaaaggaagcaca
gctggcggatgcagaaatttccctgccacattctggattaacccacagttcaagataaaa
ctggaggaggaggatggcgatgatgactatggctctgaaaccggttgcaccttcctcctt
gcacttatgcaaaagaacaaaagaaaagagaggcgctttgggaaagatatggagaccatt
ggattcgcagtctatgaggttcccagagagtttcttggacagtctggtgtgcatctaaag
cgggacttcttcctccaaaacgcctcccgtgctcgctcagagcagttcatcaacctgcga
gaggtcagcacccgccacaaactgccccccggagaatacattgtggtgccttctaccttt
gaacctaatgtggaaggagactttgtcattagagtcttctctgaaaacaagcatggctct
gttgagatggatgatcctttatctgctgacctacctcctgaggaagttctgtcagagact
gaaatcgatcaagggttcaagaaccttttcaagcagctagctggtgctgatatggaaatc
agttatacggagttacagtccattttaaataaaattgtatcaaaacataaagatctccgc
acaacgggatttagtttggagtcgtgccgcagcatggtgaacctgatggataaagatgga
aatgggaaattaggactggtggagttcaatattctgtggaataaaattaagaattacttg
accatattccgaaagtttgacatggataaatctggaagcatgagcgcatatgagatgcgt
ctagctttggagtctgcaggtttcaagttgaccaacagtctgcaccagctcatcatcacc
agatactcggagcctgatatggccgtgaatttcgatagcttcacatgctgtctcatcagg
ctggagactatgttccgatttttccagggtatggacacacagaaacaaggagtgatcaat
tttgacctgtttagttggctccaaatgacaatgtttgcatag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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