KEGG   Xenopus laevis (African clawed frog): 380324
Entry
380324            CDS       T01010                                 
Symbol
ddx19b.S, ddx19, ddx19b
Name
(RefSeq) DEAD-box helicase 19B S homeolog
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03013  Nucleocytoplasmic transport
xla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    380324 (ddx19b.S)
   03015 mRNA surveillance pathway
    380324 (ddx19b.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    380324 (ddx19b.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     380324 (ddx19b.S)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 380324
NCBI-ProteinID: NP_001080632
Xenbase: XB-GENE-5903234
UniProt: Q7ZWV1
Position
7S:110272298..110287014
AA seq 487 aa
MATDSWALAVDEQEAAAETLGKLNLKEEKVEKLKPESNGTDDAESAEQTDGKNVEKKDDD
DKEDKAAQSLLNKLIRNNLVGNTNQVEVLQRDPNSPLYSVKSFEELRLKPELLQGVYAMG
FNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVDPANRYPQCLCLSPT
YELALQTGKVIEQMGQFSNIKLAYAVRGKKLERGHKIPEHIVIGTPGTVLDWCSKLRFID
PKKIKVFVLDEADVMIATQGHQDQSIRIQKMLPRDCQMLLFSATFEESVWRFAQKVVPEP
NIIKLKREEETLDTIKQYYVMCNNRDDKFRALCNIYGSITIAQAMIFCHTRKTASWLAGE
LYKEGHQVAMLSGEMMVEQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPV
DKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHNMEILQRIQQHFSKKIEHLDADDID
EIEKISK
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggcgactgattcctgggccctggcggtggatgaacaggaggcggcggctgagacgctt
ggcaagttaaacctgaaagaagaaaaagtggagaagctaaagccagagagcaatggcaca
gatgatgcggagagtgcagagcagactgacggcaagaatgtagagaagaaagacgatgat
gataaagaggacaaagccgcccagtcgctgctcaacaagcttattcggaataatctggtc
ggcaacacaaaccaagtggaggttctgcaacgggatccgaattctcccctgtactctgtc
aagtcatttgaggagctgagactgaagccagaactcctccaaggtgtctacgccatggga
tttaacaggccctccaagatccaagagaatgctttgcccatgatgctggctgagccgcct
cagaacctcattgcccagtctcagtcgggaacaggtaaaactgctgccttcgttcttgcc
atgctgagccgagtggatcctgcaaacagatatccccagtgcttgtgcctctctccaacc
tacgagctggctctacagaccgggaaggtcattgaacaaatggggcagttttcgaacatc
aaattggcctacgctgtacgaggaaagaaactggaacgtggacataagattccggagcat
attgttattggcacaccaggaactgtgctcgactggtgctccaaactgaggtttattgat
cccaagaagattaaggtgtttgtacttgatgaagccgacgtgatgatcgctactcaggga
caccaggatcagagtatccgcatccagaagatgctgccccgggactgccagatgctgctc
ttctccgccacgtttgaagaatccgtgtggaggtttgcacagaaagtggtgccggaaccc
aacatcatcaaactgaaaagggaggaggagaccctggacaccatcaaacagtactacgtc
atgtgtaataaccgcgacgataagttccgagctctgtgcaacatctacggctccatcacc
atcgcacaggccatgatcttctgccatacccgcaagactgcatcctggttggccggtgag
ctgtacaaagaaggccaccaggtggccatgctgagcggagagatgatggtggagcagagg
gcagccgtcattgatcgattccgagagggtaaagagaaagtgttggttacaaccaacgtg
tgcgccagaggtatcgacgtggaacaagtgtctgttgtgattaactttgaccttcccgtg
gacaaggacgggaacccggataacgagacctaccttcatagaatcggtcgcacggggcgc
ttcggcaagcgagggctggccatcaatatggttgacagtaaacacaacatggagattctc
caacggatccagcagcacttcagtaaaaagattgaacacctcgacgctgatgacattgat
gaaattgaaaaaatcagtaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system