KEGG T01010: 380339

Xenopus laevis (African clawed frog): 380339

Entry

380339 CDS T01010

Gene name

thbs3, tsp-3

Definition

thrombospondin 3

Orthology

K04659

thrombospondin 2/3/4/5

Organism

xla Xenopus laevis (African clawed frog)

Pathway

xla04145	Phagosome
xla04510	Focal adhesion
xla04512	ECM-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:xla04512]
Cellular Processes; Transport and catabolism; Phagosome [PATH:xla04145]
Cellular Processes; Cell communication; Focal adhesion [PATH:xla04510]

SSDB

Motif

Pfam:

TSP_C TSP_3 COMP EGF_CA EGF_3 cEGF EGF

Other DBs

NCBI-GI:

NCBI-GeneID:

Xenbase:

UniProt:

AA seq 964 aa
MGRQDPTRRHFLLLLLLLLSCFFCWAQSSRQDVHVIDLLTVSESRHMSGVVEKIRSELLG
VNDLYFLSTFRLPPKAGGVLFGLYSKKDNTKWLEASIVGKINKVLVRYMREDSKLHAVSL
QNANLSDGNMHTMILRVSGFRGDTLSLELYVDCKQVDTSMGLPEMMIIPQFEVESGDIRS
GHKAYLRMQGSVESMKLILGGSLGRVGALSECPFQEDESIHNTVNGVVNSILGEHTKALI
TQMTLFNKVLAELREDIRDQVKEMSLIRNTIMECQVCGFHEHRSRCNPNPCFPGVDCMET
YEYPGYRCGPCPTGSQGNGTYCADIDECSHANPCFSGSKCINTSPGFRCEHCPRGYKGNT
VSGVGVDYAKASKQVCRDIDECNDGNNGGCDANSICTNTVGSFRCGPCKPGFVGNQTVGC
VPKKSCASPAFNPCHVNGHCVFERNGDITCACNVGWAGNGYTCGRDTDLDGYPDKPMPCI
DNNKHCRQDNCRSTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDT
DSFGDACDNCPNVPNNDQKDTDANGEGDACDNDIDGDGIPNMLDNCPKVPNPLQTDRDLD
GVGDACDSCPEASNPTQADADSDLVGDMCDTNQDRDGDGHQDTKDNCPDIPNSSQLDSDN
DGKGDECDQDDDNDGIPDYIPPGPDNCRLIHNPNQKDSDGDGVGDVCEEDFDNDTVIDPL
DVCPESAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAF
NGVDFEGTFHVNTVTDDDHAGFIFSYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGLQL
KAVKSTTGPGEQLRNALWNTGHTQDQVRLLWKDPRNVGWKDKTSYRWQLMHRPQVGYIRV
KLYEGVDLVADSGVIIDTTMRGGRLGVFCFSQENIIWSNLQYRCNDTIPEDFEPYRRLLL
DGKN

NT seq 2895 nt +upstreamnt +downstreamnt
atggggagacaggacccaacgaggcgacatttcctactgctgctactgcttcttctctcc
tgcttcttctgctgggcacagtcatccaggcaagatgtgcacgttatcgacctcctgacg
gtcagcgagtcccggcacatgtccggtgtggtggaaaagattcgctctgagctgctgggt
gtcaatgacctctactttctctccaccttccggctgccccccaaggcaggaggggtcctg
tttggtctctactctaagaaggataacaccaaatggctggaggcctccatagtgggcaag
atcaacaaagtgctagtgcgttacatgagggaagactccaagctccatgcagtcagttta
cagaatgccaacctgtcggatggaaacatgcacactatgattctgcgtgtgagcggcttc
cggggggacacactctcattggaactgtatgtagactgcaagcaggtggacaccagcatg
gggcttccagaaatgatgatcattccccagtttgaggtggagtccggggatatccgctct
ggacacaaagcctacctaaggatgcagggatctgtggagtccatgaaactgatccttggt
gggtccctgggtcgtgtgggagcactaagtgagtgccctttccaagaagatgagtccatt
cataatacagtcaacggagtggttaattctatccttggtgagcacacgaaagctttgatc
actcaaatgactctcttcaataaagtcttagcagagctgagagaggacatacgagaccag
gttaaagagatgtcactaatcaggaataccatcatggaatgccaagtgtgcgggttccat
gagcaccgctcccgctgtaaccccaatccctgcttcccaggggtagactgtatggaaaca
tatgagtacccagggtatcgctgtggcccctgcccaactggatcccagggcaatggcacc
tactgtgctgacatagatgagtgctctcatgccaacccttgtttctctggctcaaaatgc
atcaacacatcaccaggtttccgctgcgagcactgcccacgagggtacaagggcaacact
gtgtctggggtgggagtggactatgccaaagccagtaaacaggtttgcagagacattgat
gaatgtaatgatggaaacaatggaggatgtgatgccaactccatctgcaccaacactgtg
ggatcattcagatgtggcccttgcaagcctggctttgtgggtaatcagacagtaggatgc
gtccctaaaaaatcctgtgccagcccagccttcaacccgtgccatgtgaatggacattgt
gtttttgagaggaacggagacatcacatgcgcatgtaacgttggctgggcagggaatggg
tacacgtgtggccgagacacggatctggatggatacccagataagccaatgccgtgtata
gacaacaataagcactgcaggcaggacaactgccgctcgacgcccaactctgggcaagaa
gatgccgacaatgatgggattggggaccagtgtgatgaagatgcagatggggacgggatc
aagaacgttgaggataactgccgacttgtcccaaacaaggaccagcagaactcagacact
gactcttttggcgacgcttgtgataattgccccaatgtgcccaataatgaccagaaggac
acggatgctaacggggaaggagatgcgtgtgacaatgacattgatggcgatgggatcccc
aatatgctggacaactgccccaaagtgcccaatcccctgcagacagatcgagacctcgat
ggggtgggggatgcatgtgacagttgcccggaggccagtaaccccacacaggcagatgct
gacagcgatttggttggagatatgtgcgataccaatcaggacagggatggagatggccac
caggacaccaaagacaactgcccggatatccccaacagctcccagttagactcagataat
gatgggaaaggggatgagtgtgaccaagatgatgataatgatggaatccccgattacatc
cccccaggaccagacaattgccggctgatacacaaccccaaccagaaggactcagacggg
gacggcgttggggatgtgtgcgaggaagacttcgataatgataccgtcatcgaccccctg
gatgtctgtcctgaaagtgcggaagtcactctcaccgatttcagagcctatcagactgtt
atcttagaccccgagggggatgctcagatagaccctaattgggttgtgctgaatcagggg
atggagattgttcagacgatgaacagtgaccccggcttggcagttggttacacggccttc
aacggggtggactttgaggggacattccatgtaaatactgtgaccgatgatgaccatgct
ggcttcatcttcagctatcaggacagctccagcttttatgtggtaatgtggaaacagaca
gagcagacctactggcaggcaaccccattccgagctgtagcagagcctggactacaactg
aaggctgtgaaatccacaacaggcccaggcgagcagctgcgcaatgccctatggaacacc
ggccacactcaagaccaggttcgtttgctatggaaggaccctcgtaacgttggctggaag
gacaagacttcttatcgctggcagctcatgcatagaccccaagtgggctacatcagggta
aagctgtatgaaggagttgacctggtggctgattctggagttatcatagatacaactatg
agagggggaagattgggggtcttctgcttctcccaggaaaacatcatttggtccaattta
cagtaccggtgtaatgacacaattccagaagactttgaaccataccgacgacttctactg
gatgggaaaaattaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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