KEGG   Xenopus laevis (African clawed frog): 380595
Entry
380595            CDS       T01010                                 
Symbol
snrpf.S, snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    380595 (snrpf.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    380595 (snrpf.S)
   03041 Spliceosome [BR:xla03041]
    380595 (snrpf.S)
   03032 DNA replication proteins [BR:xla03032]
    380595 (snrpf.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     380595 (snrpf.S)
Spliceosome [BR:xla03041]
 Complex A
  U1 snRNP components
   Sm proteins
    380595 (snrpf.S)
  U2 snRNP components
    380595 (snrpf.S)
 Complex B
  U1 snRNP components
    380595 (snrpf.S)
  U4/U6.U5 tri-snRNP components
    380595 (snrpf.S)
 Complex C
  U2 snRNP components
    380595 (snrpf.S)
DNA replication proteins [BR:xla03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     380595 (snrpf.S)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 380595
NCBI-ProteinID: NP_001080901
Xenbase: XB-GENE-1188432
UniProt: P62321 A0A974HSR2
Position
3S:complement(90679704..90683223)
AA seq 86 aa
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagtttaccactgaatcccaaacctttccttaatggcctcactggtaagccagttatg
gtaaagctgaaatgggggatggagtacaaagggtatctggtatcagtggatggatacatg
aatatgcagcttgcaaacacagaagaatacattgacggtgcgttgtctggacatcttgga
gaagttttaataagatgcaacaatgtattatatatacgtggggtagaagaagaggaggaa
gatggagagatgagagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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