KEGG   Xenopus laevis (African clawed frog): 398447
Entry
398447            CDS       T01010                                 
Symbol
wdr43.S
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    398447 (wdr43.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xla03009]
    398447 (wdr43.S)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    398447 (wdr43.S)
SSDB
Motif
Pfam: Utp12 WD40 ANAPC4_WD40 WD40_like WD40_2 DUF2415
Other DBs
NCBI-GeneID: 398447
NCBI-ProteinID: XP_018120398
Xenbase: XB-GENE-17343088
UniProt: A0A1L8G0Y1 A0A974HHA8
Position
5S:10073189..10094227
AA seq 663 aa
MAAAGGVYELLPPPCAFSPRGRDLLALSGPDGRIQVWDTQGGGLRKEYVPSAHLSATCTC
LAWAQGRADKETHQKKKRKSEASDRAGHYDLLTIGTATGTILLYNIVKGELQSKLVGGHD
GRVNCVRWHHENNSLYSCSEDKHIIEWNTQTCKVKCKWKGDNSSVSSLCISPDGKILLSA
GRTIKLWDLETKEVYRQFTGHSTAVTSLMFLTVQPPQGSHPIKDSTGLYFLSGAVHDRLI
SVWQVRSEKEKSSVLSFTLTEPPLFVDLSPSESKEEPLKLAVVCRDGQLHLFEHVLNGTH
KKPIAPTCTVQIATSGSDDSTPKPIPILAAAFCADRQSLLLFYGSTVQPIIEKVALKTDE
PNICLIRDIQKTVSLRKDMPVTKVKTPVVNSDSKVLTPGIPGHSSAISAAMAHTKKQESK
RKPGDNEASIEDRLDAMDIDTTKVQSKGGLPQTDNFAVLLVQGLESNDVNILNKVFQTKN
DSLIRKTVARIPVYAVIPLVHELTWRLQGHPLSTIMMVRWLKAVLVLHASYLSTLPDLVP
QLGMLYQLMENRVKNLPKLSRLNGKLYLLITQVSAAERAQSTALDQEAKLVYEEESSEES
DEELPGESDEDWVEGEEEEEEEHMEEDESETEDKEEESEDEDMNVGKINGDSDPDAGNES
EEE
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggcggcagcgggcggcgtgtacgagctgcttcccccaccgtgcgccttctccccgcgc
ggccgggacctactggctctgtccggacccgacgggaggatccaagtgtgggacacccag
ggcgggggcttgagaaaggaatatgttccctccgcgcatctcagcgcgacctgtacctgc
ctggcgtgggctcagggccgagccgacaaggaaactcatcagaaaaagaaaaggaaatcg
gaggcgtcagacagggccgggcactacgaccttctcaccatcggcaccgccactggcacc
attttattgtacaacattgttaaaggagagctacagagcaagctggtcggagggcatgac
ggcagggtgaactgcgtgcggtggcaccacgagaacaattccttgtacagttgctcagag
gacaaacacatcatcgagtggaacacacagacctgcaaagtcaagtgcaaatggaaagga
gacaacagcagtgtcagcagtttgtgcatcagccccgatgggaagattttactttcagcg
ggaagaaccatcaaactctgggatctggagaccaaagaagtctataggcaatttacaggg
cactcaacagcggtcacatcactcatgttcctgacggtgcagccgccccaggggtctcat
cctatcaaagactcaacaggcctttatttcttgtccggtgccgtgcacgaccggttaatc
agcgtatggcaggttcgatctgaaaaggagaaaagttctgtcctatccttcactctcaca
gaaccaccgttatttgtggacctgagtccatctgagagcaaagaggagcccctgaagctg
gcggtcgtgtgccgggatgggcagttgcacttatttgaacatgtgttaaacgggactcac
aagaagccgatagcacctacttgtacggtacagatcgcaacgtcgggcagcgatgactcc
acccccaagcccatccctattctggctgccgctttctgtgccgacagacagtccctgctc
cttttctacggtagcaccgtgcagcccatcattgagaaagtggcgctgaagacagacgag
cccaacatatgccttatccgcgacatccaaaagactgtgtcactcagaaaggacatgcct
gtaacaaaggtgaaaactccagttgtaaattcagactcaaaagttctaacgcccggaatc
ccaggtcacagttcggcaatttcagccgccatggcacataccaaaaagcaggagagcaag
aggaagccaggagacaatgaggccagcatagaggatcgacttgatgctatggatatagac
accaccaaagtgcagagtaaaggaggcttgccgcagactgacaactttgccgttttgctg
gtgcaagggctggaaagcaatgatgtaaacatcctcaataaagtctttcagaccaaaaac
gactcgttaataaggaaaacggtggccagaatccctgtttatgccgttatccccctggtg
cacgagcttacatggagattacaaggacatcccttgagtacaataatgatggtgaggtgg
ctaaaggctgtgttggtcctccatgcgtcctacctctccactttgccggatttggtccca
cagctggggatgttgtaccaactcatggagaacagagtgaagaacctgcccaaactgtct
cgcctcaatgggaagctctacctcctcataacacaggtgtctgcggctgagagagctcaa
agtacggcccttgatcaggaggcaaaacttgtctatgaagaagagtcttcggaagaatct
gatgaggagctgcctggggagtctgatgaggattgggtggaaggagaggaggaggaggag
gaggagcatatggaggaagatgagagtgaaacggaggataaagaggaagagtctgaagat
gaagacatgaatgtggggaaaataaatggggattcagatccagacgctggcaatgaaagt
gaagaggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (50)   

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