KEGG   Xenopus laevis (African clawed frog): 398649
Entry
398649            CDS       T01010                                 
Symbol
ddx17.L, ddx17
Name
(RefSeq) DEAD-box helicase 17 L homeolog
  KO
K13178  ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    398649 (ddx17.L)
Enzymes [BR:xla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     398649 (ddx17.L)
Spliceosome [BR:xla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    398649 (ddx17.L)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2
Other DBs
NCBI-GeneID: 398649
NCBI-ProteinID: NP_001082679
Xenbase: XB-GENE-1000765
UniProt: Q66JB0 A0A974D794
Position
4L:118331632..118355257
AA seq 610 aa
MRGSFMDRDRGGGAGMSRFPKFGNPGERLRKKRWDLNELPKFEKNFYTEHPEVARMTQHD
VEELRRKKEITIRGVNCPKPLYAFHQANFPQYVLDVLLDQRFKEPTPIQCQGFPLALSGR
DMVGIAQTGSGKTLAYLLPAMVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK
TSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADR
MLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYSQINIGNLELSANHN
ILQIVDVCQESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDELTRRMRRDGWPAMCIH
GDKSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRT
ARSTNKGTAYTFFTPGNLKQARELVKVLEEANQTINPKLMQLVDHGRGGGGGGRSRYRTI
GTNNNPNMMYQEECNRRMGGKDGGRRDGRNNNRDGGISNNPTGRDQNRPNYSYGGQGSNF
QPNQYNYGQGSFTGGVANSYGTSAYGQAPQPLMSQQFAPPSSSGLLNYMNQAASYQYPPP
PPPPPPPTRK
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgagggggagtttcatggatcgcgaccgaggcggtggtgctggtatgtctcgctttcca
aaatttggaaaccctggagagcggctccgaaagaagcgctgggatctaaacgagctgcca
aagtttgaaaagaatttctatacagaacaccctgaagtggcacgcatgacacagcatgat
gtggaggagctccgtaggaagaaagaaattaccatccgtggtgtgaactgccctaaacct
ttatatgccttccatcaagcaaatttcccacagtatgtgcttgacgttcttctggaccag
cgatttaaggagcccacaccaatccagtgccaaggatttccccttgctttgagcggccgt
gatatggtgggcattgctcaaactggatctggcaagacacttgcgtatctgctgcctgcc
atggttcatattaaccaccagccgtacctagagcgaggagacgggccaatttgccttgtt
ttggctccaaccagagagcttgctcagcaagtacaacaagtggctgatgactatggaaag
acatctcgcttaaaaagtacctgtatctatggtggggctcctaaaggaccacaaatacga
gatctggagagaggggtggaaatttgcattgccactccaggcaggctgattgacttcctt
gaggcaggaaaaaccaaccttagacgttgcacgtaccttgtgttagatgaagctgacaga
atgcttgacatgggttttgagccacagatccgcaaaatagttgaccaaatcaggcctgat
agacaaacactcatgtggagtgctacttggccaaaagaggtgcgccagctagctgaggac
ttcttgagggactattcacagataaatattggaaatttggaactttccgccaaccacaac
attctccagattgtagatgtgtgccaggaaagtgagaaagatcacaagcttatccagttg
atggaagaaataatggcagagaaagagaataaaaccattatctttgtggaaacaaagcgt
cgttgtgatgaactaacccgtagaatgaggcgtgatggctggcctgcgatgtgtatccat
ggtgacaaaagccaacaagagcgtgactgggttctatgtgagtttcgtactgggaaggca
cctattcttattgcaacagatgttgcttcgcggggtctagacgtggaggatatcaagttc
gtcattaattatgactacccaaacagctctgaggactacgtacatcgcattggccgtacc
gcccgtagtactaacaaaggcacagcttacacattcttcacacccggtaacctcaaacaa
gccagagaactggttaaagttctagaagaagcaaatcaaaccatcaaccctaaactaatg
cagctggtggaccatggccgtggtggtggtggaggtggccgatccagatatcgtaccatt
ggcacaaataacaatccgaatatgatgtaccaggaagaatgcaacagaagaatgggcggt
aaagatggaggcaggcgtgatgggaggaacaataaccgcgatggtggtatttctaacaat
ccaaccgggcgagatcagaaccggccaaattacagctacggtggccagggttccaatttc
caacccaaccaatacaactatggacagggttccttcacaggaggggtagctaatagttat
ggcacatcagcatatggtcaagcaccacagcctctgatgtcccagcagtttgcccccccc
agttcttctggcctattgaactatatgaaccaggcagccagttatcagtatccgcctccc
ccaccaccacctcctccacccacacgtaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (54)   

Download RDF
DBGET integrated database retrieval system