KEGG   Xenopus laevis (African clawed frog): 399078
Entry
399078            CDS       T01010                                 
Symbol
sumo1.L, dap1, gmp1, ofc10, pic1, senp2, smt3, smt3c, sumo-1, sumo1, sumo1-a, sumo1-b, Ubl1, xsumo-1, xsumo1
Name
(RefSeq) small ubiquitin-related modifier 1-A
  KO
K12160  small ubiquitin-related modifier
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    399078 (sumo1.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    399078 (sumo1.L)
   03029 Mitochondrial biogenesis [BR:xla03029]
    399078 (sumo1.L)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    399078 (sumo1.L)
Ubiquitin system [BR:xla04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   399078 (sumo1.L)
Mitochondrial biogenesis [BR:xla03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Fission and Fusion factors
    399078 (sumo1.L)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Septins
   Septin associated proteins
    399078 (sumo1.L)
SSDB
Motif
Pfam: Rad60-SLD ubiquitin
Other DBs
NCBI-GeneID: 399078
NCBI-ProteinID: NP_001083717
Xenbase: XB-GENE-6254630
UniProt: O57686
Position
9_10L:89842184..89854915
AA seq 102 aa
MSDQEAKPSSEDLGDKKDGGDYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYRQRQGVPM
NSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQTGGHSTF
NT seq 309 nt   +upstreamnt  +downstreamnt
atgtctgatcaggaagcgaaaccatctagcgaggatctaggagacaaaaaagatggaggg
gattatatcaaactcaaagtcattggacaggacagcagtgaaattcacttcaaggtaaag
atgacaacgcatcttaaaaagctgaaagagtcataccgtcagagacagggcgttccaatg
aattctctcaggtttttgtttgaagggcaaagaatctcagatcaccagactcctaaggag
ctcggaatggaggaagaggatgttattgaagtttatcaggaacagactgggggccactcg
acattttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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