KEGG   Xenopus laevis (African clawed frog): 444830
Entry
444830            CDS       T01010                                 
Symbol
nudt21.L, cpsf5, nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
  KO
K14397  cleavage and polyadenylation specificity factor subunit 5
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    444830 (nudt21.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    444830 (nudt21.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor Im (CFIm)
     444830 (nudt21.L)
SSDB
Motif
Pfam: NUDIX_2
Other DBs
NCBI-GeneID: 444830
NCBI-ProteinID: NP_001086401
Xenbase: XB-GENE-921424
UniProt: Q6DJE4 A0A974D4V3
Position
4L:44036670..44046798
AA seq 227 aa
MSVLPPNRSQTGWPRGVNQFGNKYLQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtccgtgttgcctccaaatcgttcccagaccggatggccccgtggggtgaatcaattc
gggaacaagtacctccaacaaaccaagcctctgaccctggagagaaccatcaacctgtat
ccccttacaaattacacttttggtaccaaagagcctttgtatgaaaaagacagttcagtg
gctgcaaggttccagcgcatgcgtgaggagtttgataagatcggaatgagacgcactgta
gaaggggttcttattgtacatgaacacagattgcctcacgtccttttactgcaactgggc
accaccttcttcaaactgcctggaggagaactcaatccaggagaggatgaggttgaaggt
ttgaaacgtttaatgacagaaatccttggccgtcaagatggagttcagcaggactgggtt
attgatgactgtattggaaattggtggaggcctaactttgaacctcctcagtatccatac
attcctgctcatattacaaaacctaaagaacacaagaaattgttcctagttcagttgcaa
gagaaagcgctgtttgctgtcccaaaaaattacaaacttgttgcggcccctttgtttgaa
ttgtacgacaatgctcctggatatggccccatcatttcaagtctcccacagcttcttagc
aggtttaattttatttacaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (44)   

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