KEGG T01010: 446985

Xenopus laevis (African clawed frog): 446985

Entry

446985 CDS T01010

Gene name

thbs4

Definition

thrombospondin 4

Orthology

K04659

thrombospondin 2/3/4/5

Organism

xla Xenopus laevis (African clawed frog)

Pathway

xla04145	Phagosome
xla04510	Focal adhesion
xla04512	ECM-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:xla04512]
Cellular Processes; Transport and catabolism; Phagosome [PATH:xla04145]
Cellular Processes; Cell communication; Focal adhesion [PATH:xla04510]

SSDB

Motif

Pfam:

TSP_C TSP_3 COMP EGF_CA cEGF EGF_3 hEGF

Other DBs

NCBI-GI:

NCBI-GeneID:

Xenbase:

UniProt:

AA seq 955 aa
MPRGKGLCLFLQMLLLHLYGVCQAQPNYQVFDLLSVSVQRQVTSFLQNALSNPSMNEVYV
LSTFKLQPKSTVTLFGLYSTSDNSRLFEFTVIGRLNKASLRYLRSDGKLHIVFFNNIDLA
DGKQHTLLLHMSGLHRGSSFADLYLDCHPVAGVKDLPRPLSGISHNTGSVLLRTLQKRGQ
DSMDELKLVMGGTLSQIGSIQECFMQQSEPGQQTGDVSRQLIGQITLMTQLLGELRDVMR
QQVKETMFLRNTISECQACGLGPDDPLPTEAPKRQTTTAPPKPQCDASSCFRGVRCINAE
TGFQCGPCPEGYTGNGVICTDVDECQLNPCFPGVRCINTSPGFKCESCPPGYTGSTIQGI
GINFAKQNKQVCTDINECENGRNGGCTSNSLCINTMGSFRCGACKPGYVGDQIKGCKPEK
SCRHGQNPCHASAQCSEEKDRDITCTCSVGWAGNGYLCGKDTDIDGYPDEALPCPDKNCK
KDNCKYVPNSGQEDTDKDKIGDACDEDADGDGILNEQDNCVLAVNIDQKNSDQDIFGDAC
DNCRLTLNNDQRDTDNDGKGDACDDDMDGDGIKNILDNCQRVPNVDQKDKDGDGVGDACD
SCPDIINPNQSDIDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSSQLDTDKDGIGDEC
DDDDDNDGIPDTVPPGPDNCRLVPNPGQEDDNNDGVGDVCEADFDQDTVIDRIDVCPENA
EITLTDFRAYQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEG
TFHVNTLTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKS
GPGEHLRNALWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFYEGTE
LVADSGVTVDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQAFQAQQFSS

NT seq 2868 nt +upstreamnt +downstreamnt
atgccaagaggaaaaggcttgtgtctattcctacagatgttacttcttcatctttatgga
gtatgccaagcccagccaaattatcaagtgttcgatcttctctctgtgtcggttcaaagg
caggtcacctctttccttcaaaatgcactgagcaatccttccatgaatgaggtttatgtc
ttgtcaactttcaaactgcagcccaagtccacagttacgctctttggactttattccacc
agtgacaacagcaggttgtttgaattcacagttattggtcgtttaaacaaagcctcatta
cgataccttagaagtgatgggaagctacacattgtcttctttaataacattgacttagct
gatgggaagcagcacacacttctgttgcacatgagcggcctacaccggggctcaagcttt
gctgacctctacttggactgtcatccggtggctggtgttaaagatctaccccgtccatta
tccgggataagccataacacaggatcggtgctcttgagaacactacagaaaaggggacag
gattccatggatgaattaaaactggtaatgggaggcactctttctcagataggatcaata
caagaatgctttatgcagcaaagtgagcccggtcagcaaacaggtgatgtcagcagacag
ttgattggccagataaccctaatgactcagctgctgggagagctccgagatgtcatgaga
cagcaggtgaaggagaccatgttcttgagaaacaccatttcagaatgccaggcctgtggc
ttaggtcctgatgacccattgccaactgaagctccaaagcgccaaaccaccactgcgcct
ccaaagcctcaatgtgatgcaagttcttgtttcagaggagtgaggtgcattaacgccgag
actgggttccagtgtggcccttgtcctgaaggctacacaggcaacggagtcatttgtact
gatgtagatgagtgtcagttaaatccatgtttccctggtgttcgttgcataaacacttct
ccgggattcaaatgtgagagctgtcctcccgggtacactggatccacaattcaagggatt
ggcattaactttgccaagcaaaataagcaggtttgcacagatatcaatgaatgtgaaaat
gggagaaatggaggctgtacttccaattctctttgcatcaatacaatgggatctttccgc
tgtggggcctgcaaacctggttatgttggggatcaaataaaaggctgcaaacctgaaaaa
agctgccgccatggacagaatccgtgtcatgccagcgctcaatgttcagaggaaaaggac
cgtgacataacctgcacttgttcagtcggttgggccggcaatggctacctctgtggcaaa
gatacggatattgatggatacccggatgaagcactgccatgcccagataagaactgcaaa
aaggacaactgtaaatatgttcctaactcgggtcaagaagacactgataaagataaaatt
ggagatgcttgtgatgaagatgcggatggagacggtatcctaaatgaacaggataactgt
gtactggctgtcaacatcgatcagaaaaacagtgaccaagatatatttggggatgcctgt
gacaactgccggttaaccctcaacaatgaccaaagggacacagacaatgatgggaaaggg
gatgcttgtgacgatgacatggatggagatggcatcaagaacatcttggataactgccag
agagttcccaatgtggaccagaaagacaaagatggagatggtgttggcgatgcttgtgac
agctgccctgacatcataaatccaaaccagtcagacattgacaatgacctcgttggagat
tcctgtgatactaaccaggacagtgatggtgatggtcaccaggacagcacagacaactgc
cccacagtgattaacagctcccagctcgacacagacaaggacggcatcggcgatgaatgc
gacgacgatgatgataatgatggaattccggatactgttcctcccggacctgataattgt
agactggtgcccaacccagggcaggaggatgacaacaatgatggagttggagatgtctgt
gaggccgatttcgaccaggacactgtcattgaccgaattgacgtttgccctgaaaacgca
gagatcactctgacagatttcagagcttatcaaaccgtggttctagatcctgaaggggat
gcccaaattgatccaaactggattgttctgaaccagggaatggagattgtgcagactatg
aatagtgaccctggactggcagttggttacacagcatttaatggagttgatttcgagggc
acattccatgtgaacacactgactgatgatgattacgctggtttcatctttggctaccag
gacagttcaagcttttatgtggttatgtggaagcagactgaacagacttactggcaggcc
accccctttagagctgtagcagagcctggcatccagctgaaggccgtcaaatccaagtca
ggacctggggaacatctaaggaacgcattgtggcacacaggagacaccaatgatcaagtg
aggctgctttggaaagacccaaggaacgttggctggaaagacaaagtgtcctaccgctgg
ttcttacagcacaggccccaagtaggatacatcagggctagattttatgaaggcactgaa
cttgtggctgactctggtgttactgtggacaccaccatgcgtggaggaagactgggagta
ttctgcttttcacaagaaaacatcatttggtccaatctgaaataccggtgtaatgataca
atcccagaggatttccaggcatttcaagcacaacagttttccagttaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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