KEGG   Xiphophorus maculatus (southern platyfish): 102217228
Entry
102217228         CDS       T02923                                 
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102217228 (hspd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102217228 (hspd1)
   03110 Chaperones and folding catalysts [BR:xma03110]
    102217228 (hspd1)
   03029 Mitochondrial biogenesis [BR:xma03029]
    102217228 (hspd1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xma04147]
    102217228 (hspd1)
Enzymes [BR:xma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     102217228 (hspd1)
Messenger RNA biogenesis [BR:xma03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     102217228 (hspd1)
Chaperones and folding catalysts [BR:xma03110]
 Heat shock proteins
  HSP60 / Chaperonin
   102217228 (hspd1)
Mitochondrial biogenesis [BR:xma03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    102217228 (hspd1)
Exosome [BR:xma04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102217228 (hspd1)
  Exosomal proteins of other body fluids (saliva and urine)
   102217228 (hspd1)
  Exosomal proteins of breast cancer cells
   102217228 (hspd1)
  Exosomal proteins of colorectal cancer cells
   102217228 (hspd1)
  Exosomal proteins of bladder cancer cells
   102217228 (hspd1)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 102217228
NCBI-ProteinID: XP_005816401
Ensembl: ENSXMAG00000005891
UniProt: M3ZUM7
Position
7:3015976..3024377
AA seq 575 aa
MFRLPTVMKQVRPVCRALAPHLTRAYAKEVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMLAVETVINELKKLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKRVGRKGVITVKDGKTLQDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLALEDIQAHDFGRVGEVQITKDDTLVLKG
GGSPADIEKRAAEIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDALKTANNDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGASDMGYDAMQGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEMPAGMGGMGGMGGMGGGMGF
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtttcgtctacctaccgtcatgaaacaggtgaggcctgtgtgccgggccctggctcct
cacctcacacgagcatacgccaaggaggtgaagtttggggcggacgcgcgcgccctcatg
ctgcagggggtggacctgctggctgacgctgtggccgtcaccatggggccaaagggtcgc
actgtcatcatcgagcagagttggggcagtccaaaggtcaccaaggatggcgtgacggtg
gccaaaagcatcgacctgaaggacaagtacaagaacattggggccaagctggtgcaagat
gtggccaacaacaccaacgaggaggccggcgacggtaccaccacggccacggtgctggcg
cgggccatcgccaaggagggcttcgacaacatcagcaagggcgccaaccccgtggagatc
cggcgtggagtcatgttggccgtggagacggtcatcaacgagctgaagaagctctcgaag
cctgttacaaccccagaggagatcgcacaggtcgctaccatctcagccaatggagacgtg
gaaatcggtaacatcatttccaatgccatgaagagagttggccgcaagggagtcatcaca
gtaaaggatgggaagactttgcaggacgagctggagatcattgagggaatgaagtttgac
cgtggttacatctctccttacttcatcaacactgctaaaggccagaagtgtgagttccag
gacgcctacctgctgctcagtgagaagaagatctccagcgtccagagcatcgtaccggct
ctggaaatcgccaaccagcaccgcaaacctctggtgattgtagctgaggatgtggacgga
gaagctctgagcaccctggttctcaacaggctgaaggtcggtcttcaggtggtcgctgtc
aaagctccaggtttcggagacaacaggaagaaccagctgaaggacatggccatcgccacc
ggcgggacggtgtttggtgatgaagctctgggtctggctctggaggacatccaggctcac
gactttggcagagtgggtgaggtgcagatcaccaaagacgacactctggttctgaagggc
ggaggcagccccgccgacatcgagaagcgagcggcagagatcgccgagcagctggagaac
accaccagcgactacgagaaggagaagctcaatgagaggctggccaagctgtctgacggg
gtggccgttctcaaggtggggggaaccagcgacgtcgaagtgaacgagaagaaggaccgc
gtgacggatgctctgaacgccacccgggccgccgtggaggagggcattgttctcggcgga
ggctgcgctctgctgcgatgcatcccggcgttggacgccctgaaaaccgccaacaatgac
cagaagatcggcgtggacatcatcaggcgggcgctccgtattcctgccatgaccatcgct
aagaacgctggtgtggagggctccctggtggtggagaagatcctgcagggagcgtcagac
atgggctatgatgccatgcagggagagtacgttaacatggtggagaagggcatcatcgac
cccacaaaggtggtaaggacggcgctgatggacgccgccggagtcgcgtctctactttcc
accgccgaggccgtcgttacggagatccccaaggaggagaaggagatgccagcaggcatg
ggcggcatggggggaatgggaggaatgggaggcggcatggggttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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