KEGG   Xiphophorus maculatus (southern platyfish): 102222620
Entry
102222620         CDS       T02923                                 
Symbol
hdac9
Name
(RefSeq) histone deacetylase 9 isoform X3
  KO
K11409  histone deacetylase 9 [EC:3.5.1.98]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xma03036]
    102222620 (hdac9)
Enzymes [BR:xma01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102222620 (hdac9)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102222620 (hdac9)
SSDB
Motif
Pfam: HDAC4_Gln
Other DBs
NCBI-GeneID: 102222620
NCBI-ProteinID: XP_005804686
Ensembl: ENSXMAG00000013839
Position
3:complement(14995501..15020291)
AA seq 624 aa
MLQTIYEGESSFSTTEGRVGHQHLPNQSKMHNMNNSVDIKPDVPLAVEPLSPLDLRTDLR
MLGPGSDPGLWERQLQQELLLIQKQQQIQKQLLISEFQKQHEKLTRQHQAQLQEHLKLQQ
ELQAMKQQQELAEKERRLEQQQQQQQQQNQQEKELEWHRREQHVSSLSLRGKERSRESAV
ASTEVKQKLQEFLLNKSAKDPVTNGANHSFIQHPKLWYTSSHHASLDQSSPPLGTSPTCQ
YTLPSPIESKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPMLKRRDGNIITPYKKRALE
LMDSAPTNSAPGSGPSSPIGASSALGAENGPSSLPTTTKTERWPSQPRLFRPEGSMSMLS
LYTSPSLPNISLGLSTTSTPISAAMGLNDRSTEIKHGLPGHLLGPVPLQTALESKVSPSH
QALLQHLLQKEQIRQQKIISSGQGSMSSHAQSPLVMKDRPSSSRPKLPKHRPLNRTQSAP
LPQNTLAQLVIQQQHQHFLEKQKQYQQQVHINKLLSKSIEQLRQPSTHLQESEEEQEEQQ
PREEMESMQEDRLPPGGVIRKHTLSSSSSGSSSGELPDAHCGVIKVKEEPADSEDEALTN
RRLVSEQSTYLHQVKGRLVIRAMI
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgctgcagacgatttacgagggcgagtcaagtttctccacaacagaggggcgcgtcgga
caccagcatctccccaaccagagcaagatgcacaacatgaacaactcagtcgacattaag
ccagacgtgccattggctgtggagcccctgtcccctttggacctacgcacagacctgagg
atgctggggccaggctcagaccccggactgtgggagaggcagctccagcaggagctgctc
ctcattcagaagcagcagcagatccagaagcagttactgatcagcgagtttcagaagcag
cacgagaagctgacccgtcagcaccaggctcagcttcaggagcatctcaagctccagcaa
gagctccaggccatgaagcagcagcaggaactcgctgagaaggagcgccgtctggagcag
cagcagcagcagcaacaacaacagaaccagcaggaaaaagagctggagtggcatcgacga
gagcagcatgtctccagcctgagcctcaggggcaaggagcgctcccgagagagtgcagtg
gccagcacagaggtgaagcagaaactccaagagtttctgttgaacaaatctgcaaaggat
ccagtcactaatggagccaatcactctttcatccaacatcccaaactctggtacacgtcc
tcacaccacgcatccctggaccaaagctctccaccactgggcacatcgcccacctgccag
tacactctgccgtcacctatcgagagcaaggacgacttccccttgaggaagacagcatct
gagccaaatctgaaggtacgatccagactgaagcagaaggtggcagagaggagaagcagt
ccaatgctgaagagaagagacgggaacatcattactccttacaaaaagagggctttagag
cttatggattcagcgccaactaacagcgcccctgggtctggccccagctctcccataggg
gcctctagtgccttgggggctgaaaacggaccctcctctctgcctacaacaacaaaaact
gagaggtggccttcccagccaagattattccgacctgagggctccatgtccatgctgagc
ttgtacacatctccatccttacccaatatctccttggggctctctactacatccacacca
attagtgctgctatgggcttaaatgacagatcgacggaaatcaagcatgggttgcctggg
cacctgctgggccctgtgccacttcagacagccctggagtcaaaggtcagccccagccac
caggctctgctccagcacctcctccagaaggagcaaatcaggcagcagaagatcatctct
tctggtcaaggctccatgtcctcccacgctcagtcccctctggtcatgaaggatcggccc
tccagcagtcgccctaagctaccaaaacacagacccctgaacagaacccagtcagcacct
ctgcctcagaacacactggcccaactcgtcatccagcagcagcaccagcatttcttggag
aaacagaaacagtaccagcagcaggtccacataaataagctgttatccaagtccattgag
cagttacgtcagcccagcacacacctgcaggaatcagaggaggagcaggaggagcagcag
cctagagaggagatggagagcatgcaggaggacaggctgccccctggaggagtcattcgg
aagcacacgctaagcagcagcagcagtggcagctcgagcggcgagctcccagatgctcac
tgtggggtcatcaaggtcaaagaggaaccagctgatagtgaggacgaggctctgaccaat
cggcgcctagtatccgaacagagcacctatctccaccaggtcaaagggaggctggtgata
agagccatgatctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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